Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LCHNA4D1U4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LCHNA4D1U4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LCHNA4D1U4 AL133380.1-201ENST00000506013 324 ntBASIC30.57■■■□□ 2.48
LCHNA4D1U4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
LCHNA4D1U4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
LCHNA4D1U4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LCHNA4D1U4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LCHNA4D1U4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.53■■■□□ 2.48
LCHNA4D1U4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LCHNA4D1U4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
LCHNA4D1U4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LCHNA4D1U4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.46■■■□□ 2.47
LCHNA4D1U4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LCHNA4D1U4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LCHNA4D1U4 MIR7108-201ENST00000614319 87 ntBASIC30.44■■■□□ 2.46
LCHNA4D1U4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.43■■■□□ 2.46
LCHNA4D1U4 ABHD17AP4-201ENST00000411545 909 ntBASIC30.42■■■□□ 2.46
LCHNA4D1U4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.41■■■□□ 2.46
LCHNA4D1U4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.4■■■□□ 2.46
LCHNA4D1U4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.38■■■□□ 2.45
LCHNA4D1U4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.37■■■□□ 2.45
LCHNA4D1U4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.36■■■□□ 2.45
LCHNA4D1U4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
LCHNA4D1U4 MIR3665-201ENST00000578708 105 ntBASIC30.35■■■□□ 2.45
LCHNA4D1U4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
LCHNA4D1U4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.34■■■□□ 2.45
LCHNA4D1U4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
LCHNA4D1U4 AC087741.3-201ENST00000624270 1347 ntBASIC30.31■■■□□ 2.44
LCHNA4D1U4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LCHNA4D1U4 DUX4L28-201ENST00000623687 678 ntBASIC30.3■■■□□ 2.44
LCHNA4D1U4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
LCHNA4D1U4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LCHNA4D1U4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LCHNA4D1U4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
LCHNA4D1U4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.24■■■□□ 2.43
LCHNA4D1U4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LCHNA4D1U4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LCHNA4D1U4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
LCHNA4D1U4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LCHNA4D1U4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LCHNA4D1U4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LCHNA4D1U4 MIR762-201ENST00000390236 83 ntBASIC30.16■■■□□ 2.42
LCHNA4D1U4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.16■■■□□ 2.42
LCHNA4D1U4 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.15■■■□□ 2.42
LCHNA4D1U4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.14■■■□□ 2.42
LCHNA4D1U4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
LCHNA4D1U4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.13■■■□□ 2.41
LCHNA4D1U4 HLA-V-202ENST00000446817 847 ntBASIC30.13■■■□□ 2.41
LCHNA4D1U4 AC044849.2-201ENST00000606596 710 ntBASIC30.12■■■□□ 2.41
LCHNA4D1U4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.09■■■□□ 2.41
LCHNA4D1U4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
LCHNA4D1U4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
LCHNA4D1U4 AC005559.1-201ENST00000589661 871 ntBASIC30.08■■■□□ 2.41
LCHNA4D1U4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LCHNA4D1U4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.06■■■□□ 2.4
LCHNA4D1U4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LCHNA4D1U4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LCHNA4D1U4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LCHNA4D1U4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
LCHNA4D1U4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.02■■■□□ 2.4
LCHNA4D1U4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LCHNA4D1U4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30■■■□□ 2.39
LCHNA4D1U4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30■■■□□ 2.39
LCHNA4D1U4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
LCHNA4D1U4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.97■■■□□ 2.39
LCHNA4D1U4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LCHNA4D1U4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.96■■■□□ 2.39
LCHNA4D1U4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.95■■■□□ 2.39
LCHNA4D1U4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.93■■■□□ 2.38
LCHNA4D1U4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.93■■■□□ 2.38
LCHNA4D1U4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
LCHNA4D1U4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.92■■■□□ 2.38
LCHNA4D1U4 ZNRF2P2-203ENST00000454624 420 ntBASIC29.92■■■□□ 2.38
LCHNA4D1U4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.91■■■□□ 2.38
LCHNA4D1U4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
LCHNA4D1U4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
LCHNA4D1U4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LCHNA4D1U4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.87■■■□□ 2.37
LCHNA4D1U4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
LCHNA4D1U4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.86■■■□□ 2.37
LCHNA4D1U4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.85■■■□□ 2.37
LCHNA4D1U4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.85■■■□□ 2.37
LCHNA4D1U4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LCHNA4D1U4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.84■■■□□ 2.37
LCHNA4D1U4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
LCHNA4D1U4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LCHNA4D1U4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms