Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
SBNO1A3KN83 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
SBNO1A3KN83 HNRNPLP2-201ENST00000568980 1570 ntBASIC38.88■■■■□ 3.81
SBNO1A3KN83 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
SBNO1A3KN83 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC38.85■■■■□ 3.81
SBNO1A3KN83 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC38.83■■■■□ 3.81
SBNO1A3KN83 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
SBNO1A3KN83 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.8■■■■□ 3.8
SBNO1A3KN83 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
SBNO1A3KN83 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.79■■■■□ 3.8
SBNO1A3KN83 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
SBNO1A3KN83 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
SBNO1A3KN83 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
SBNO1A3KN83 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC38.7■■■■□ 3.79
SBNO1A3KN83 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC38.7■■■■□ 3.78
SBNO1A3KN83 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
SBNO1A3KN83 EBPL-202ENST00000378268 680 ntTSL 3 BASIC38.66■■■■□ 3.78
SBNO1A3KN83 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.65■■■■□ 3.78
SBNO1A3KN83 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
SBNO1A3KN83 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC38.65■■■■□ 3.78
SBNO1A3KN83 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC38.63■■■■□ 3.77
SBNO1A3KN83 MIR3665-201ENST00000578708 105 ntBASIC38.63■■■■□ 3.77
SBNO1A3KN83 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
SBNO1A3KN83 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC38.62■■■■□ 3.77
SBNO1A3KN83 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.61■■■■□ 3.77
SBNO1A3KN83 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
SBNO1A3KN83 ABHD17AP4-201ENST00000411545 909 ntBASIC38.56■■■■□ 3.76
SBNO1A3KN83 MIR7108-201ENST00000614319 87 ntBASIC38.56■■■■□ 3.76
SBNO1A3KN83 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC38.55■■■■□ 3.76
SBNO1A3KN83 AC087741.3-201ENST00000624270 1347 ntBASIC38.53■■■■□ 3.76
SBNO1A3KN83 DUX4L28-201ENST00000623687 678 ntBASIC38.5■■■■□ 3.75
SBNO1A3KN83 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
SBNO1A3KN83 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
SBNO1A3KN83 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
SBNO1A3KN83 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
SBNO1A3KN83 MLEC-202ENST00000412616 841 ntTSL 3 BASIC38.47■■■■□ 3.75
SBNO1A3KN83 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
SBNO1A3KN83 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
SBNO1A3KN83 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC38.45■■■■□ 3.75
SBNO1A3KN83 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
SBNO1A3KN83 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC38.43■■■■□ 3.74
SBNO1A3KN83 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.74
SBNO1A3KN83 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
SBNO1A3KN83 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC38.37■■■■□ 3.73
SBNO1A3KN83 CHML-205ENST00000638160 705 ntTSL 3 BASIC38.36■■■■□ 3.73
SBNO1A3KN83 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC38.36■■■■□ 3.73
SBNO1A3KN83 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC38.35■■■■□ 3.73
SBNO1A3KN83 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC38.33■■■■□ 3.73
SBNO1A3KN83 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC38.33■■■■□ 3.73
SBNO1A3KN83 AC044849.2-201ENST00000606596 710 ntBASIC38.33■■■■□ 3.73
SBNO1A3KN83 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
SBNO1A3KN83 MIR762-201ENST00000390236 83 ntBASIC38.31■■■■□ 3.72
SBNO1A3KN83 PVT1-219ENST00000523427 938 ntTSL 3 BASIC38.3■■■■□ 3.72
SBNO1A3KN83 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC38.28■■■■□ 3.72
SBNO1A3KN83 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC38.24■■■■□ 3.71
SBNO1A3KN83 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC38.24■■■■□ 3.71
SBNO1A3KN83 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC38.23■■■■□ 3.71
SBNO1A3KN83 AC005559.1-201ENST00000589661 871 ntBASIC38.23■■■■□ 3.71
SBNO1A3KN83 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
SBNO1A3KN83 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
SBNO1A3KN83 MBP-237ENST00000579129 1052 ntTSL 5 BASIC38.18■■■■□ 3.7
SBNO1A3KN83 HLA-V-202ENST00000446817 847 ntBASIC38.17■■■■□ 3.7
SBNO1A3KN83 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC38.17■■■■□ 3.7
SBNO1A3KN83 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC38.16■■■■□ 3.7
SBNO1A3KN83 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC38.16■■■■□ 3.7
SBNO1A3KN83 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC38.16■■■■□ 3.7
SBNO1A3KN83 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC38.16■■■■□ 3.7
SBNO1A3KN83 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC38.12■■■■□ 3.69
SBNO1A3KN83 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC38.11■■■■□ 3.69
SBNO1A3KN83 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC38.11■■■■□ 3.69
SBNO1A3KN83 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC38.09■■■■□ 3.69
SBNO1A3KN83 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC38.09■■■■□ 3.69
SBNO1A3KN83 DENR-202ENST00000455982 1052 ntTSL 5 BASIC38.08■■■■□ 3.69
SBNO1A3KN83 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC38.08■■■■□ 3.69
SBNO1A3KN83 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
SBNO1A3KN83 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
SBNO1A3KN83 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
SBNO1A3KN83 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
SBNO1A3KN83 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
SBNO1A3KN83 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC38.04■■■■□ 3.68
SBNO1A3KN83 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
SBNO1A3KN83 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
SBNO1A3KN83 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
SBNO1A3KN83 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
SBNO1A3KN83 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.68
SBNO1A3KN83 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC38.01■■■■□ 3.67
SBNO1A3KN83 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC38■■■■□ 3.67
SBNO1A3KN83 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
SBNO1A3KN83 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC37.99■■■■□ 3.67
SBNO1A3KN83 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC37.99■■■■□ 3.67
SBNO1A3KN83 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC37.99■■■■□ 3.67
SBNO1A3KN83 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
SBNO1A3KN83 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
SBNO1A3KN83 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.66
SBNO1A3KN83 ZNRF2P2-203ENST00000454624 420 ntBASIC37.94■■■■□ 3.66
SBNO1A3KN83 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC37.93■■■■□ 3.66
SBNO1A3KN83 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
SBNO1A3KN83 BOD1-206ENST00000480951 814 ntTSL 2 BASIC37.93■■■■□ 3.66
SBNO1A3KN83 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
SBNO1A3KN83 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms