Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.6■■□□□ 1.69
TRAV17A0A0B4J275 AL133380.1-201ENST00000506013 324 ntBASIC25.59■■□□□ 1.69
TRAV17A0A0B4J275 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRAV17A0A0B4J275 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRAV17A0A0B4J275 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRAV17A0A0B4J275 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
TRAV17A0A0B4J275 RPS2P35-201ENST00000443417 897 ntBASIC25.57■■□□□ 1.68
TRAV17A0A0B4J275 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRAV17A0A0B4J275 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRAV17A0A0B4J275 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.55■■□□□ 1.68
TRAV17A0A0B4J275 AL391121.1-201ENST00000607967 1349 ntBASIC25.55■■□□□ 1.68
TRAV17A0A0B4J275 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.54■■□□□ 1.68
TRAV17A0A0B4J275 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRAV17A0A0B4J275 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
TRAV17A0A0B4J275 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRAV17A0A0B4J275 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRAV17A0A0B4J275 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.51■■□□□ 1.67
TRAV17A0A0B4J275 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRAV17A0A0B4J275 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.49■■□□□ 1.67
TRAV17A0A0B4J275 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRAV17A0A0B4J275 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
TRAV17A0A0B4J275 AP006261.1-201ENST00000584783 668 ntBASIC25.46■■□□□ 1.67
TRAV17A0A0B4J275 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TRAV17A0A0B4J275 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRAV17A0A0B4J275 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRAV17A0A0B4J275 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TRAV17A0A0B4J275 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
TRAV17A0A0B4J275 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRAV17A0A0B4J275 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRAV17A0A0B4J275 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRAV17A0A0B4J275 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
TRAV17A0A0B4J275 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.4■■□□□ 1.66
TRAV17A0A0B4J275 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.37■■□□□ 1.65
TRAV17A0A0B4J275 AL162393.1-201ENST00000437852 946 ntBASIC25.37■■□□□ 1.65
TRAV17A0A0B4J275 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.37■■□□□ 1.65
TRAV17A0A0B4J275 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.37■■□□□ 1.65
TRAV17A0A0B4J275 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRAV17A0A0B4J275 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRAV17A0A0B4J275 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TRAV17A0A0B4J275 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.31■■□□□ 1.64
TRAV17A0A0B4J275 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.31■■□□□ 1.64
TRAV17A0A0B4J275 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.3■■□□□ 1.64
TRAV17A0A0B4J275 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.3■■□□□ 1.64
TRAV17A0A0B4J275 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.3■■□□□ 1.64
TRAV17A0A0B4J275 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRAV17A0A0B4J275 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRAV17A0A0B4J275 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRAV17A0A0B4J275 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.28■■□□□ 1.64
TRAV17A0A0B4J275 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRAV17A0A0B4J275 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAV17A0A0B4J275 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRAV17A0A0B4J275 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRAV17A0A0B4J275 MIR3665-201ENST00000578708 105 ntBASIC25.26■■□□□ 1.63
TRAV17A0A0B4J275 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRAV17A0A0B4J275 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRAV17A0A0B4J275 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
TRAV17A0A0B4J275 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.25■■□□□ 1.63
TRAV17A0A0B4J275 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV17A0A0B4J275 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAV17A0A0B4J275 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.23■■□□□ 1.63
TRAV17A0A0B4J275 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.23■■□□□ 1.63
TRAV17A0A0B4J275 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.19■■□□□ 1.62
TRAV17A0A0B4J275 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.18■■□□□ 1.62
TRAV17A0A0B4J275 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
TRAV17A0A0B4J275 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV17A0A0B4J275 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.16■■□□□ 1.62
TRAV17A0A0B4J275 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TRAV17A0A0B4J275 MIR762-201ENST00000390236 83 ntBASIC25.14■■□□□ 1.62
TRAV17A0A0B4J275 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.14■■□□□ 1.62
TRAV17A0A0B4J275 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
TRAV17A0A0B4J275 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRAV17A0A0B4J275 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TRAV17A0A0B4J275 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.11■■□□□ 1.61
TRAV17A0A0B4J275 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRAV17A0A0B4J275 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRAV17A0A0B4J275 AC005559.1-201ENST00000589661 871 ntBASIC25.09■■□□□ 1.61
TRAV17A0A0B4J275 DUX4L28-201ENST00000623687 678 ntBASIC25.09■■□□□ 1.61
TRAV17A0A0B4J275 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRAV17A0A0B4J275 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRAV17A0A0B4J275 AC087741.3-201ENST00000624270 1347 ntBASIC25.08■■□□□ 1.6
TRAV17A0A0B4J275 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TRAV17A0A0B4J275 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRAV17A0A0B4J275 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.06■■□□□ 1.6
TRAV17A0A0B4J275 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.06■■□□□ 1.6
TRAV17A0A0B4J275 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRAV17A0A0B4J275 WASH5P-204ENST00000632292 975 ntBASIC25.05■■□□□ 1.6
TRAV17A0A0B4J275 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.04■■□□□ 1.6
TRAV17A0A0B4J275 AC044849.2-201ENST00000606596 710 ntBASIC25.03■■□□□ 1.6
TRAV17A0A0B4J275 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TRAV17A0A0B4J275 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.01■■□□□ 1.59
TRAV17A0A0B4J275 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRAV17A0A0B4J275 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRAV17A0A0B4J275 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
TRAV17A0A0B4J275 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.96■■□□□ 1.59
TRAV17A0A0B4J275 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.96■■□□□ 1.59
TRAV17A0A0B4J275 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRAV17A0A0B4J275 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRAV17A0A0B4J275 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TRAV17A0A0B4J275 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.93■■□□□ 1.58
TRAV17A0A0B4J275 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms