Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV12-2A0A075B6T6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV12-2A0A075B6T6 AP002365.1-201ENST00000603448 772 ntBASIC20.51■□□□□ 0.87
TRAV12-2A0A075B6T6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV12-2A0A075B6T6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRAV12-2A0A075B6T6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRAV12-2A0A075B6T6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV12-2A0A075B6T6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV12-2A0A075B6T6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV12-2A0A075B6T6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAV12-2A0A075B6T6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
TRAV12-2A0A075B6T6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV12-2A0A075B6T6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRAV12-2A0A075B6T6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TRAV12-2A0A075B6T6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV12-2A0A075B6T6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV12-2A0A075B6T6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRAV12-2A0A075B6T6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV12-2A0A075B6T6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV12-2A0A075B6T6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV12-2A0A075B6T6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV12-2A0A075B6T6 AL031258.1-201ENST00000623562 325 ntBASIC20.44■□□□□ 0.86
TRAV12-2A0A075B6T6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV12-2A0A075B6T6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV12-2A0A075B6T6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAV12-2A0A075B6T6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV12-2A0A075B6T6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV12-2A0A075B6T6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV12-2A0A075B6T6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV12-2A0A075B6T6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
TRAV12-2A0A075B6T6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV12-2A0A075B6T6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV12-2A0A075B6T6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV12-2A0A075B6T6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV12-2A0A075B6T6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV12-2A0A075B6T6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV12-2A0A075B6T6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV12-2A0A075B6T6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV12-2A0A075B6T6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV12-2A0A075B6T6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV12-2A0A075B6T6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV12-2A0A075B6T6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV12-2A0A075B6T6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRAV12-2A0A075B6T6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV12-2A0A075B6T6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-2A0A075B6T6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-2A0A075B6T6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-2A0A075B6T6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-2A0A075B6T6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV12-2A0A075B6T6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV12-2A0A075B6T6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRAV12-2A0A075B6T6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAV12-2A0A075B6T6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV12-2A0A075B6T6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV12-2A0A075B6T6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV12-2A0A075B6T6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV12-2A0A075B6T6 AC120057.4-201ENST00000624722 1615 ntBASIC20.27■□□□□ 0.83
TRAV12-2A0A075B6T6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV12-2A0A075B6T6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV12-2A0A075B6T6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV12-2A0A075B6T6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV12-2A0A075B6T6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV12-2A0A075B6T6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV12-2A0A075B6T6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV12-2A0A075B6T6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV12-2A0A075B6T6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV12-2A0A075B6T6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV12-2A0A075B6T6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAV12-2A0A075B6T6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV12-2A0A075B6T6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV12-2A0A075B6T6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV12-2A0A075B6T6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV12-2A0A075B6T6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV12-2A0A075B6T6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV12-2A0A075B6T6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV12-2A0A075B6T6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV12-2A0A075B6T6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV12-2A0A075B6T6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.14■□□□□ 0.82
TRAV12-2A0A075B6T6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-2A0A075B6T6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV12-2A0A075B6T6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV12-2A0A075B6T6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV12-2A0A075B6T6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV12-2A0A075B6T6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV12-2A0A075B6T6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV12-2A0A075B6T6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV12-2A0A075B6T6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRAV12-2A0A075B6T6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV12-2A0A075B6T6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV12-2A0A075B6T6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms