Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 NRADDP-202ENST00000641269 1585 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 AC015802.1-201ENST00000588104 1449 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SNORA57-201ENST00000383870 149 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 AL137244.1-201ENST00000422931 865 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 PGK1P2-201ENST00000431702 1214 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 BRI3P1-201ENST00000440440 378 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 AC112250.1-201ENST00000504640 745 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 RCC2P1-201ENST00000452257 1476 ntBASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRMT13Q9NUP7 AC140479.7-201ENST00000636301 2332 ntBASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 EEF1DP5-201ENST00000431410 772 ntBASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 KRT8P34-201ENST00000577607 1044 ntBASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 PTPN20CP-201ENST00000614090 920 ntBASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRMT13Q9NUP7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms