RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
PTPN20CP-201ENST00000614090 ABCC9O60706 1549 aa30.44■■■□□ 2.46
PTPN20CP-201ENST00000614090 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
PTPN20CP-201ENST00000614090 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
PTPN20CP-201ENST00000614090 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
PTPN20CP-201ENST00000614090 NACADO15069 1562 aa28.33■■■□□ 2.12
PTPN20CP-201ENST00000614090 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
PTPN20CP-201ENST00000614090 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
PTPN20CP-201ENST00000614090 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
PTPN20CP-201ENST00000614090 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
PTPN20CP-201ENST00000614090 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
PTPN20CP-201ENST00000614090 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
PTPN20CP-201ENST00000614090 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
PTPN20CP-201ENST00000614090 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
PTPN20CP-201ENST00000614090 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
PTPN20CP-201ENST00000614090 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
PTPN20CP-201ENST00000614090 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
PTPN20CP-201ENST00000614090 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
PTPN20CP-201ENST00000614090 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
PTPN20CP-201ENST00000614090 CUX2O14529 1486 aa26.64■■□□□ 1.86
PTPN20CP-201ENST00000614090 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
PTPN20CP-201ENST00000614090 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
PTPN20CP-201ENST00000614090 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
PTPN20CP-201ENST00000614090 NESP48681 1621 aa25.92■■□□□ 1.74
PTPN20CP-201ENST00000614090 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
PTPN20CP-201ENST00000614090 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
PTPN20CP-201ENST00000614090 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
PTPN20CP-201ENST00000614090 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
PTPN20CP-201ENST00000614090 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
PTPN20CP-201ENST00000614090 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.71
PTPN20CP-201ENST00000614090 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
PTPN20CP-201ENST00000614090 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
PTPN20CP-201ENST00000614090 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
PTPN20CP-201ENST00000614090 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
PTPN20CP-201ENST00000614090 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
PTPN20CP-201ENST00000614090 WDR62O43379 1518 aa25.37■■□□□ 1.65
PTPN20CP-201ENST00000614090 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
PTPN20CP-201ENST00000614090 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
PTPN20CP-201ENST00000614090 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
PTPN20CP-201ENST00000614090 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
PTPN20CP-201ENST00000614090 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
PTPN20CP-201ENST00000614090 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
PTPN20CP-201ENST00000614090 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
PTPN20CP-201ENST00000614090 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
PTPN20CP-201ENST00000614090 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
PTPN20CP-201ENST00000614090 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
PTPN20CP-201ENST00000614090 WIZO95785 1651 aa24.87■■□□□ 1.57
PTPN20CP-201ENST00000614090 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
PTPN20CP-201ENST00000614090 CFTRP13569 1480 aa24.83■■□□□ 1.57
PTPN20CP-201ENST00000614090 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
PTPN20CP-201ENST00000614090 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
PTPN20CP-201ENST00000614090 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
PTPN20CP-201ENST00000614090 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
PTPN20CP-201ENST00000614090 TRHP20396 242 aaPredicted RBP24.6■■□□□ 1.53
PTPN20CP-201ENST00000614090 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
PTPN20CP-201ENST00000614090 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
PTPN20CP-201ENST00000614090 CHD1O14646 1710 aa24.53■■□□□ 1.52
PTPN20CP-201ENST00000614090 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
PTPN20CP-201ENST00000614090 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
PTPN20CP-201ENST00000614090 RSF1Q96T23 1441 aaPredicted RBP24.46■■□□□ 1.51
PTPN20CP-201ENST00000614090 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
PTPN20CP-201ENST00000614090 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PTPN20CP-201ENST00000614090 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
PTPN20CP-201ENST00000614090 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
PTPN20CP-201ENST00000614090 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
PTPN20CP-201ENST00000614090 FBLN2P98095 1184 aa24.23■■□□□ 1.47
PTPN20CP-201ENST00000614090 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
PTPN20CP-201ENST00000614090 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
PTPN20CP-201ENST00000614090 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
PTPN20CP-201ENST00000614090 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
PTPN20CP-201ENST00000614090 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
PTPN20CP-201ENST00000614090 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
PTPN20CP-201ENST00000614090 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
PTPN20CP-201ENST00000614090 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
PTPN20CP-201ENST00000614090 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
PTPN20CP-201ENST00000614090 SOGA1O94964 1423 aa23.96■■□□□ 1.43
PTPN20CP-201ENST00000614090 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
PTPN20CP-201ENST00000614090 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
PTPN20CP-201ENST00000614090 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
PTPN20CP-201ENST00000614090 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
PTPN20CP-201ENST00000614090 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
PTPN20CP-201ENST00000614090 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
PTPN20CP-201ENST00000614090 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
PTPN20CP-201ENST00000614090 CUX1P39880 1505 aa23.72■■□□□ 1.39
PTPN20CP-201ENST00000614090 ERCC6L2Q5T890 1561 aa23.72■■□□□ 1.39
PTPN20CP-201ENST00000614090 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
PTPN20CP-201ENST00000614090 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
PTPN20CP-201ENST00000614090 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
PTPN20CP-201ENST00000614090 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
PTPN20CP-201ENST00000614090 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
PTPN20CP-201ENST00000614090 NUP160Q12769 1436 aa23.55■■□□□ 1.36
PTPN20CP-201ENST00000614090 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
PTPN20CP-201ENST00000614090 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
PTPN20CP-201ENST00000614090 ABCC10Q5T3U5 1492 aa23.44■■□□□ 1.34
PTPN20CP-201ENST00000614090 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
PTPN20CP-201ENST00000614090 KDM6BO15054 1643 aa23.4■■□□□ 1.34
PTPN20CP-201ENST00000614090 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
PTPN20CP-201ENST00000614090 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
PTPN20CP-201ENST00000614090 FAM69CQ0P6D2 419 aa23.37■■□□□ 1.33
PTPN20CP-201ENST00000614090 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms