RNA–Protein interactions for RNA: ENST00000582043.5

RBFOX3-206, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 5 BASIC

Gene RBFOX3, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-206ENST00000582043 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
RBFOX3-206ENST00000582043 ABCC9O60706 1549 aa29.65■■■□□ 2.34
RBFOX3-206ENST00000582043 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.31
RBFOX3-206ENST00000582043 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
RBFOX3-206ENST00000582043 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
RBFOX3-206ENST00000582043 NACADO15069 1562 aa27.86■■■□□ 2.05
RBFOX3-206ENST00000582043 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
RBFOX3-206ENST00000582043 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
RBFOX3-206ENST00000582043 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
RBFOX3-206ENST00000582043 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
RBFOX3-206ENST00000582043 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
RBFOX3-206ENST00000582043 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
RBFOX3-206ENST00000582043 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
RBFOX3-206ENST00000582043 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
RBFOX3-206ENST00000582043 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
RBFOX3-206ENST00000582043 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
RBFOX3-206ENST00000582043 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
RBFOX3-206ENST00000582043 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
RBFOX3-206ENST00000582043 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
RBFOX3-206ENST00000582043 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
RBFOX3-206ENST00000582043 CUX2O14529 1486 aa25.64■■□□□ 1.69
RBFOX3-206ENST00000582043 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
RBFOX3-206ENST00000582043 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
RBFOX3-206ENST00000582043 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
RBFOX3-206ENST00000582043 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
RBFOX3-206ENST00000582043 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
RBFOX3-206ENST00000582043 NESP48681 1621 aa25.43■■□□□ 1.66
RBFOX3-206ENST00000582043 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
RBFOX3-206ENST00000582043 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
RBFOX3-206ENST00000582043 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
RBFOX3-206ENST00000582043 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
RBFOX3-206ENST00000582043 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
RBFOX3-206ENST00000582043 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
RBFOX3-206ENST00000582043 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
RBFOX3-206ENST00000582043 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
RBFOX3-206ENST00000582043 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
RBFOX3-206ENST00000582043 WIZO95785 1651 aa24.88■■□□□ 1.57
RBFOX3-206ENST00000582043 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
RBFOX3-206ENST00000582043 WDR62O43379 1518 aa24.83■■□□□ 1.57
RBFOX3-206ENST00000582043 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
RBFOX3-206ENST00000582043 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
RBFOX3-206ENST00000582043 CFTRP13569 1480 aa24.63■■□□□ 1.53
RBFOX3-206ENST00000582043 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
RBFOX3-206ENST00000582043 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
RBFOX3-206ENST00000582043 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
RBFOX3-206ENST00000582043 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
RBFOX3-206ENST00000582043 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
RBFOX3-206ENST00000582043 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
RBFOX3-206ENST00000582043 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
RBFOX3-206ENST00000582043 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
RBFOX3-206ENST00000582043 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
RBFOX3-206ENST00000582043 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
RBFOX3-206ENST00000582043 RIMBP3CA6NJZ7 1639 aa24.16■■□□□ 1.46
RBFOX3-206ENST00000582043 RIMBP3BA6NNM3 1639 aa24.16■■□□□ 1.46
RBFOX3-206ENST00000582043 RIMBP3Q9UFD9 1639 aa24.16■■□□□ 1.46
RBFOX3-206ENST00000582043 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
RBFOX3-206ENST00000582043 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
RBFOX3-206ENST00000582043 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
RBFOX3-206ENST00000582043 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
RBFOX3-206ENST00000582043 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
RBFOX3-206ENST00000582043 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.43
RBFOX3-206ENST00000582043 CHD1O14646 1710 aa23.94■■□□□ 1.42
RBFOX3-206ENST00000582043 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
RBFOX3-206ENST00000582043 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
RBFOX3-206ENST00000582043 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
RBFOX3-206ENST00000582043 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
RBFOX3-206ENST00000582043 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
RBFOX3-206ENST00000582043 FBLN2P98095 1184 aa23.75■■□□□ 1.39
RBFOX3-206ENST00000582043 SOGA1O94964 1423 aa23.75■■□□□ 1.39
RBFOX3-206ENST00000582043 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
RBFOX3-206ENST00000582043 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
RBFOX3-206ENST00000582043 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
RBFOX3-206ENST00000582043 CUX1P39880 1505 aa23.71■■□□□ 1.39
RBFOX3-206ENST00000582043 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
RBFOX3-206ENST00000582043 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
RBFOX3-206ENST00000582043 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
RBFOX3-206ENST00000582043 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
RBFOX3-206ENST00000582043 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
RBFOX3-206ENST00000582043 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
RBFOX3-206ENST00000582043 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
RBFOX3-206ENST00000582043 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
RBFOX3-206ENST00000582043 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
RBFOX3-206ENST00000582043 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
RBFOX3-206ENST00000582043 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
RBFOX3-206ENST00000582043 ERCC6L2Q5T890 1561 aa23.32■■□□□ 1.32
RBFOX3-206ENST00000582043 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
RBFOX3-206ENST00000582043 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
RBFOX3-206ENST00000582043 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
RBFOX3-206ENST00000582043 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
RBFOX3-206ENST00000582043 NUP160Q12769 1436 aa23.26■■□□□ 1.31
RBFOX3-206ENST00000582043 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
RBFOX3-206ENST00000582043 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
RBFOX3-206ENST00000582043 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
RBFOX3-206ENST00000582043 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
RBFOX3-206ENST00000582043 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
RBFOX3-206ENST00000582043 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
RBFOX3-206ENST00000582043 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
RBFOX3-206ENST00000582043 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
RBFOX3-206ENST00000582043 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
RBFOX3-206ENST00000582043 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms