RNA–Protein interactions for RNA: ENST00000638696.1

PAX6-237, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-237ENST00000638696 NISCHQ9Y2I1 1504 aa32.14■■■□□ 2.74
PAX6-237ENST00000638696 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
PAX6-237ENST00000638696 ABCC9O60706 1549 aa28.27■■■□□ 2.12
PAX6-237ENST00000638696 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
PAX6-237ENST00000638696 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
PAX6-237ENST00000638696 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
PAX6-237ENST00000638696 NACADO15069 1562 aa26.96■■□□□ 1.91
PAX6-237ENST00000638696 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.86
PAX6-237ENST00000638696 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
PAX6-237ENST00000638696 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
PAX6-237ENST00000638696 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
PAX6-237ENST00000638696 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
PAX6-237ENST00000638696 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
PAX6-237ENST00000638696 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
PAX6-237ENST00000638696 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
PAX6-237ENST00000638696 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
PAX6-237ENST00000638696 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
PAX6-237ENST00000638696 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
PAX6-237ENST00000638696 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
PAX6-237ENST00000638696 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
PAX6-237ENST00000638696 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
PAX6-237ENST00000638696 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
PAX6-237ENST00000638696 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
PAX6-237ENST00000638696 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
PAX6-237ENST00000638696 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
PAX6-237ENST00000638696 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
PAX6-237ENST00000638696 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
PAX6-237ENST00000638696 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
PAX6-237ENST00000638696 CUX2O14529 1486 aa24.58■■□□□ 1.53
PAX6-237ENST00000638696 WIZO95785 1651 aa24.48■■□□□ 1.51
PAX6-237ENST00000638696 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
PAX6-237ENST00000638696 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
PAX6-237ENST00000638696 NESP48681 1621 aa24.37■■□□□ 1.49
PAX6-237ENST00000638696 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
PAX6-237ENST00000638696 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
PAX6-237ENST00000638696 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
PAX6-237ENST00000638696 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
PAX6-237ENST00000638696 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
PAX6-237ENST00000638696 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
PAX6-237ENST00000638696 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
PAX6-237ENST00000638696 CFTRP13569 1480 aa23.99■■□□□ 1.43
PAX6-237ENST00000638696 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
PAX6-237ENST00000638696 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
PAX6-237ENST00000638696 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
PAX6-237ENST00000638696 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
PAX6-237ENST00000638696 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
PAX6-237ENST00000638696 WDR62O43379 1518 aa23.74■■□□□ 1.39
PAX6-237ENST00000638696 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
PAX6-237ENST00000638696 PRDM2Q13029 1718 aa23.64■■□□□ 1.38
PAX6-237ENST00000638696 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
PAX6-237ENST00000638696 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
PAX6-237ENST00000638696 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
PAX6-237ENST00000638696 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
PAX6-237ENST00000638696 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
PAX6-237ENST00000638696 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
PAX6-237ENST00000638696 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
PAX6-237ENST00000638696 SOGA1O94964 1423 aa23.27■■□□□ 1.32
PAX6-237ENST00000638696 CUX1P39880 1505 aa23.24■■□□□ 1.31
PAX6-237ENST00000638696 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
PAX6-237ENST00000638696 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
PAX6-237ENST00000638696 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
PAX6-237ENST00000638696 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
PAX6-237ENST00000638696 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
PAX6-237ENST00000638696 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
PAX6-237ENST00000638696 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
PAX6-237ENST00000638696 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
PAX6-237ENST00000638696 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
PAX6-237ENST00000638696 FBLN2P98095 1184 aa23.09■■□□□ 1.29
PAX6-237ENST00000638696 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
PAX6-237ENST00000638696 ARHGEF11O15085 1522 aa23.01■■□□□ 1.27
PAX6-237ENST00000638696 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
PAX6-237ENST00000638696 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
PAX6-237ENST00000638696 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
PAX6-237ENST00000638696 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
PAX6-237ENST00000638696 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
PAX6-237ENST00000638696 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
PAX6-237ENST00000638696 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
PAX6-237ENST00000638696 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
PAX6-237ENST00000638696 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
PAX6-237ENST00000638696 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
PAX6-237ENST00000638696 SNAPC4Q5SXM2 1469 aa22.93■■□□□ 1.26
PAX6-237ENST00000638696 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
PAX6-237ENST00000638696 CHD1O14646 1710 aa22.86■■□□□ 1.25
PAX6-237ENST00000638696 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
PAX6-237ENST00000638696 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
PAX6-237ENST00000638696 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
PAX6-237ENST00000638696 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
PAX6-237ENST00000638696 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
PAX6-237ENST00000638696 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
PAX6-237ENST00000638696 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
PAX6-237ENST00000638696 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
PAX6-237ENST00000638696 KIF27Q86VH2 1401 aa22.64■■□□□ 1.21
PAX6-237ENST00000638696 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
PAX6-237ENST00000638696 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
PAX6-237ENST00000638696 IGF1RP08069 1367 aa22.59■■□□□ 1.21
PAX6-237ENST00000638696 NUP160Q12769 1436 aa22.53■■□□□ 1.2
PAX6-237ENST00000638696 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
PAX6-237ENST00000638696 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
PAX6-237ENST00000638696 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
PAX6-237ENST00000638696 CUL7Q14999 1698 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 264.5 ms