RNA–Protein interactions for RNA: ENST00000573708.1

MED11-202, Transcript of mediator complex subunit 11, humanhuman

TSL 2 BASIC

Gene MED11, Length 802 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED11-202ENST00000573708 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
MED11-202ENST00000573708 ABCC9O60706 1549 aa29.58■■■□□ 2.33
MED11-202ENST00000573708 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.26
MED11-202ENST00000573708 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
MED11-202ENST00000573708 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
MED11-202ENST00000573708 NACADO15069 1562 aa27.75■■■□□ 2.03
MED11-202ENST00000573708 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
MED11-202ENST00000573708 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
MED11-202ENST00000573708 UNC13AQ9UPW8 1703 aa27.29■■□□□ 1.96
MED11-202ENST00000573708 MYO15BQ96JP2 1530 aa27.27■■□□□ 1.96
MED11-202ENST00000573708 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
MED11-202ENST00000573708 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
MED11-202ENST00000573708 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
MED11-202ENST00000573708 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
MED11-202ENST00000573708 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
MED11-202ENST00000573708 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
MED11-202ENST00000573708 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
MED11-202ENST00000573708 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
MED11-202ENST00000573708 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
MED11-202ENST00000573708 CUX2O14529 1486 aa25.68■■□□□ 1.7
MED11-202ENST00000573708 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
MED11-202ENST00000573708 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
MED11-202ENST00000573708 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
MED11-202ENST00000573708 SMARCA2P51531 1590 aa25.39■■□□□ 1.66
MED11-202ENST00000573708 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
MED11-202ENST00000573708 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
MED11-202ENST00000573708 NESP48681 1621 aa25.28■■□□□ 1.64
MED11-202ENST00000573708 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
MED11-202ENST00000573708 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
MED11-202ENST00000573708 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
MED11-202ENST00000573708 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
MED11-202ENST00000573708 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
MED11-202ENST00000573708 PDS5BQ9NTI5 1447 aa25.02■■□□□ 1.6
MED11-202ENST00000573708 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
MED11-202ENST00000573708 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
MED11-202ENST00000573708 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
MED11-202ENST00000573708 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
MED11-202ENST00000573708 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
MED11-202ENST00000573708 WDR62O43379 1518 aa24.69■■□□□ 1.54
MED11-202ENST00000573708 WIZO95785 1651 aa24.59■■□□□ 1.53
MED11-202ENST00000573708 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
MED11-202ENST00000573708 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
MED11-202ENST00000573708 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
MED11-202ENST00000573708 CFTRP13569 1480 aa24.47■■□□□ 1.51
MED11-202ENST00000573708 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
MED11-202ENST00000573708 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.49
MED11-202ENST00000573708 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
MED11-202ENST00000573708 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
MED11-202ENST00000573708 RIMBP3CA6NJZ7 1639 aa24.11■■□□□ 1.45
MED11-202ENST00000573708 RIMBP3BA6NNM3 1639 aa24.11■■□□□ 1.45
MED11-202ENST00000573708 RIMBP3Q9UFD9 1639 aa24.11■■□□□ 1.45
MED11-202ENST00000573708 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
MED11-202ENST00000573708 ZNF608Q9ULD9 1512 aaPredicted RBP24.09■■□□□ 1.45
MED11-202ENST00000573708 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
MED11-202ENST00000573708 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
MED11-202ENST00000573708 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
MED11-202ENST00000573708 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
MED11-202ENST00000573708 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
MED11-202ENST00000573708 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
MED11-202ENST00000573708 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
MED11-202ENST00000573708 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.41
MED11-202ENST00000573708 FBLN2P98095 1184 aa23.84■■□□□ 1.41
MED11-202ENST00000573708 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
MED11-202ENST00000573708 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
MED11-202ENST00000573708 CHD1O14646 1710 aa23.78■■□□□ 1.4
MED11-202ENST00000573708 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
MED11-202ENST00000573708 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
MED11-202ENST00000573708 SOGA1O94964 1423 aa23.69■■□□□ 1.38
MED11-202ENST00000573708 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
MED11-202ENST00000573708 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
MED11-202ENST00000573708 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
MED11-202ENST00000573708 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
MED11-202ENST00000573708 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
MED11-202ENST00000573708 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
MED11-202ENST00000573708 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
MED11-202ENST00000573708 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
MED11-202ENST00000573708 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
MED11-202ENST00000573708 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
MED11-202ENST00000573708 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
MED11-202ENST00000573708 CUX1P39880 1505 aa23.44■■□□□ 1.34
MED11-202ENST00000573708 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
MED11-202ENST00000573708 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
MED11-202ENST00000573708 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
MED11-202ENST00000573708 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
MED11-202ENST00000573708 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
MED11-202ENST00000573708 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
MED11-202ENST00000573708 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
MED11-202ENST00000573708 NUP160Q12769 1436 aa23.12■■□□□ 1.29
MED11-202ENST00000573708 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
MED11-202ENST00000573708 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
MED11-202ENST00000573708 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
MED11-202ENST00000573708 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
MED11-202ENST00000573708 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
MED11-202ENST00000573708 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
MED11-202ENST00000573708 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
MED11-202ENST00000573708 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
MED11-202ENST00000573708 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
MED11-202ENST00000573708 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
MED11-202ENST00000573708 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
MED11-202ENST00000573708 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms