RNA–Protein interactions for RNA: ENST00000527647.5

C9orf135-205, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best) BASIC

Gene C9orf135, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-205ENST00000527647 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.79
C9orf135-205ENST00000527647 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
C9orf135-205ENST00000527647 ABCC9O60706 1549 aa27.8■■■□□ 2.04
C9orf135-205ENST00000527647 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
C9orf135-205ENST00000527647 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
C9orf135-205ENST00000527647 NACADO15069 1562 aa27.03■■□□□ 1.92
C9orf135-205ENST00000527647 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
C9orf135-205ENST00000527647 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
C9orf135-205ENST00000527647 RB1CC1Q8TDY2 1594 aa26.94■■□□□ 1.9
C9orf135-205ENST00000527647 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
C9orf135-205ENST00000527647 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
C9orf135-205ENST00000527647 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
C9orf135-205ENST00000527647 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
C9orf135-205ENST00000527647 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
C9orf135-205ENST00000527647 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
C9orf135-205ENST00000527647 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
C9orf135-205ENST00000527647 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
C9orf135-205ENST00000527647 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
C9orf135-205ENST00000527647 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
C9orf135-205ENST00000527647 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
C9orf135-205ENST00000527647 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
C9orf135-205ENST00000527647 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
C9orf135-205ENST00000527647 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
C9orf135-205ENST00000527647 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
C9orf135-205ENST00000527647 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
C9orf135-205ENST00000527647 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
C9orf135-205ENST00000527647 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
C9orf135-205ENST00000527647 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
C9orf135-205ENST00000527647 WIZO95785 1651 aa24.7■■□□□ 1.54
C9orf135-205ENST00000527647 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
C9orf135-205ENST00000527647 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
C9orf135-205ENST00000527647 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
C9orf135-205ENST00000527647 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
C9orf135-205ENST00000527647 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
C9orf135-205ENST00000527647 CFTRP13569 1480 aa24.14■■□□□ 1.46
C9orf135-205ENST00000527647 NESP48681 1621 aa24.14■■□□□ 1.46
C9orf135-205ENST00000527647 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
C9orf135-205ENST00000527647 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
C9orf135-205ENST00000527647 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
C9orf135-205ENST00000527647 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
C9orf135-205ENST00000527647 KIF21AQ7Z4S6 1674 aa23.82■■□□□ 1.4
C9orf135-205ENST00000527647 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
C9orf135-205ENST00000527647 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
C9orf135-205ENST00000527647 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
C9orf135-205ENST00000527647 CUX2O14529 1486 aa23.71■■□□□ 1.39
C9orf135-205ENST00000527647 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
C9orf135-205ENST00000527647 WDR62O43379 1518 aa23.66■■□□□ 1.38
C9orf135-205ENST00000527647 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
C9orf135-205ENST00000527647 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
C9orf135-205ENST00000527647 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
C9orf135-205ENST00000527647 CUX1P39880 1505 aa23.42■■□□□ 1.34
C9orf135-205ENST00000527647 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
C9orf135-205ENST00000527647 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
C9orf135-205ENST00000527647 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
C9orf135-205ENST00000527647 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
C9orf135-205ENST00000527647 SOGA1O94964 1423 aa23.31■■□□□ 1.32
C9orf135-205ENST00000527647 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
C9orf135-205ENST00000527647 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
C9orf135-205ENST00000527647 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
C9orf135-205ENST00000527647 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
C9orf135-205ENST00000527647 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
C9orf135-205ENST00000527647 WDR97A6NE52 1622 aa23.16■■□□□ 1.3
C9orf135-205ENST00000527647 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
C9orf135-205ENST00000527647 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
C9orf135-205ENST00000527647 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
C9orf135-205ENST00000527647 AQRO60306 1485 aaKnown RBP eCLIP23.1■■□□□ 1.29
C9orf135-205ENST00000527647 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
C9orf135-205ENST00000527647 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
C9orf135-205ENST00000527647 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
C9orf135-205ENST00000527647 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
C9orf135-205ENST00000527647 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
C9orf135-205ENST00000527647 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
C9orf135-205ENST00000527647 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
C9orf135-205ENST00000527647 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
C9orf135-205ENST00000527647 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
C9orf135-205ENST00000527647 IGF1RP08069 1367 aa22.86■■□□□ 1.25
C9orf135-205ENST00000527647 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
C9orf135-205ENST00000527647 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
C9orf135-205ENST00000527647 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
C9orf135-205ENST00000527647 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
C9orf135-205ENST00000527647 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
C9orf135-205ENST00000527647 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
C9orf135-205ENST00000527647 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
C9orf135-205ENST00000527647 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
C9orf135-205ENST00000527647 FBLN2P98095 1184 aa22.73■■□□□ 1.23
C9orf135-205ENST00000527647 EEA1Q15075 1411 aa22.71■■□□□ 1.23
C9orf135-205ENST00000527647 ADAMTS12P58397 1594 aa22.7■■□□□ 1.22
C9orf135-205ENST00000527647 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
C9orf135-205ENST00000527647 CHD1O14646 1710 aa22.68■■□□□ 1.22
C9orf135-205ENST00000527647 CUL7Q14999 1698 aa22.67■■□□□ 1.22
C9orf135-205ENST00000527647 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
C9orf135-205ENST00000527647 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
C9orf135-205ENST00000527647 NUP160Q12769 1436 aa22.59■■□□□ 1.21
C9orf135-205ENST00000527647 PRXQ9BXM0 1461 aa22.57■■□□□ 1.2
C9orf135-205ENST00000527647 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
C9orf135-205ENST00000527647 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
C9orf135-205ENST00000527647 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
C9orf135-205ENST00000527647 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
C9orf135-205ENST00000527647 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
C9orf135-205ENST00000527647 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms