Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MARK2P16-201ENST00000605714 1723 ntBASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 AC092580.1-201ENST00000433998 658 ntBASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 EEF1DP1-201ENST00000585891 896 ntBASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN22Q8N7P3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 AGGF1P10-201ENST00000635005 2191 ntBASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 FMO6P-201ENST00000236166 1620 ntBASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 AC115284.2-201ENST00000624646 2054 ntBASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN22Q8N7P3 AL354877.1-201ENST00000424412 413 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms