RNA–Protein interactions for RNA: ENST00000432255.6

CTCFL-208, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-208ENST00000432255 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
CTCFL-208ENST00000432255 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
CTCFL-208ENST00000432255 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
CTCFL-208ENST00000432255 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.44
CTCFL-208ENST00000432255 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
CTCFL-208ENST00000432255 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
CTCFL-208ENST00000432255 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
CTCFL-208ENST00000432255 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
CTCFL-208ENST00000432255 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
CTCFL-208ENST00000432255 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
CTCFL-208ENST00000432255 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
CTCFL-208ENST00000432255 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
CTCFL-208ENST00000432255 HRCP23327 699 aa22.49■■□□□ 1.19
CTCFL-208ENST00000432255 ABCC9O60706 1549 aa22.48■■□□□ 1.19
CTCFL-208ENST00000432255 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
CTCFL-208ENST00000432255 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
CTCFL-208ENST00000432255 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
CTCFL-208ENST00000432255 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
CTCFL-208ENST00000432255 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CTCFL-208ENST00000432255 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
CTCFL-208ENST00000432255 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
CTCFL-208ENST00000432255 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
CTCFL-208ENST00000432255 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
CTCFL-208ENST00000432255 NACADO15069 1562 aa21.98■■□□□ 1.11
CTCFL-208ENST00000432255 WIZO95785 1651 aa21.9■■□□□ 1.1
CTCFL-208ENST00000432255 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
CTCFL-208ENST00000432255 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
CTCFL-208ENST00000432255 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
CTCFL-208ENST00000432255 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
CTCFL-208ENST00000432255 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
CTCFL-208ENST00000432255 ZEB1P37275 1124 aaPredicted RBP21.43■■□□□ 1.02
CTCFL-208ENST00000432255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
CTCFL-208ENST00000432255 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
CTCFL-208ENST00000432255 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
CTCFL-208ENST00000432255 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
CTCFL-208ENST00000432255 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
CTCFL-208ENST00000432255 SOGA1O94964 1423 aa21.34■■□□□ 1.01
CTCFL-208ENST00000432255 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1
CTCFL-208ENST00000432255 SMARCA2P51531 1590 aa21.32■■□□□ 1
CTCFL-208ENST00000432255 CCER1Q8TC90 406 aaPredicted RBP21.31■■□□□ 1
CTCFL-208ENST00000432255 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
CTCFL-208ENST00000432255 RANGAP1P46060 587 aaPredicted RBP21.24■□□□□ 0.99
CTCFL-208ENST00000432255 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
CTCFL-208ENST00000432255 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
CTCFL-208ENST00000432255 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
CTCFL-208ENST00000432255 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
CTCFL-208ENST00000432255 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
CTCFL-208ENST00000432255 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
CTCFL-208ENST00000432255 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
CTCFL-208ENST00000432255 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
CTCFL-208ENST00000432255 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
CTCFL-208ENST00000432255 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
CTCFL-208ENST00000432255 EEA1Q15075 1411 aa20.91■□□□□ 0.94
CTCFL-208ENST00000432255 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
CTCFL-208ENST00000432255 APLP2Q06481 763 aa20.82■□□□□ 0.92
CTCFL-208ENST00000432255 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
CTCFL-208ENST00000432255 CLIP1P30622 1438 aa20.8■□□□□ 0.92
CTCFL-208ENST00000432255 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
CTCFL-208ENST00000432255 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
CTCFL-208ENST00000432255 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
CTCFL-208ENST00000432255 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
CTCFL-208ENST00000432255 KIF21BO75037 1637 aa20.61■□□□□ 0.89
CTCFL-208ENST00000432255 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
CTCFL-208ENST00000432255 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
CTCFL-208ENST00000432255 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
CTCFL-208ENST00000432255 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
CTCFL-208ENST00000432255 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
CTCFL-208ENST00000432255 ITGAEP38570 1179 aa20.52■□□□□ 0.87
CTCFL-208ENST00000432255 KANK4Q5T7N3 995 aaPredicted RBP20.51■□□□□ 0.87
CTCFL-208ENST00000432255 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
CTCFL-208ENST00000432255 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
CTCFL-208ENST00000432255 CUX1P39880 1505 aa20.44■□□□□ 0.86
CTCFL-208ENST00000432255 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
CTCFL-208ENST00000432255 MIER1Q8N108 512 aa20.4■□□□□ 0.86
CTCFL-208ENST00000432255 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
CTCFL-208ENST00000432255 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
CTCFL-208ENST00000432255 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
CTCFL-208ENST00000432255 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
CTCFL-208ENST00000432255 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
CTCFL-208ENST00000432255 P3H3Q8IVL6 736 aa20.34■□□□□ 0.85
CTCFL-208ENST00000432255 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
CTCFL-208ENST00000432255 CFTRP13569 1480 aa20.3■□□□□ 0.84
CTCFL-208ENST00000432255 CUX2O14529 1486 aa20.28■□□□□ 0.84
CTCFL-208ENST00000432255 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.83
CTCFL-208ENST00000432255 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
CTCFL-208ENST00000432255 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
CTCFL-208ENST00000432255 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
CTCFL-208ENST00000432255 IGF1RP08069 1367 aa20.19■□□□□ 0.82
CTCFL-208ENST00000432255 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
CTCFL-208ENST00000432255 FAM50AQ14320 339 aaKnown RBP20.16■□□□□ 0.82
CTCFL-208ENST00000432255 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
CTCFL-208ENST00000432255 CCNB3Q8WWL7 1395 aa20.13■□□□□ 0.81
CTCFL-208ENST00000432255 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
CTCFL-208ENST00000432255 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
CTCFL-208ENST00000432255 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
CTCFL-208ENST00000432255 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.8
CTCFL-208ENST00000432255 NESP48681 1621 aa20.01■□□□□ 0.79
CTCFL-208ENST00000432255 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
CTCFL-208ENST00000432255 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
CTCFL-208ENST00000432255 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms