RNA–Protein interactions for RNA: ENST00000395155.3

STX1A-203, Transcript of syntaxin 1A, humanhuman

TSL 2 BASIC

Gene STX1A, Length 783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-203ENST00000395155 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
STX1A-203ENST00000395155 CCDC180Q9P1Z9 1646 aa33.81■■■■□ 3
STX1A-203ENST00000395155 ABCC9O60706 1549 aa33.8■■■■□ 3
STX1A-203ENST00000395155 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
STX1A-203ENST00000395155 NACADO15069 1562 aa32■■■□□ 2.71
STX1A-203ENST00000395155 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
STX1A-203ENST00000395155 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
STX1A-203ENST00000395155 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
STX1A-203ENST00000395155 PABPN1Q86U42 306 aaKnown RBP eCLIP31.51■■■□□ 2.63
STX1A-203ENST00000395155 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
STX1A-203ENST00000395155 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
STX1A-203ENST00000395155 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
STX1A-203ENST00000395155 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
STX1A-203ENST00000395155 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
STX1A-203ENST00000395155 SCRIBQ14160 1630 aa30.81■■■□□ 2.52
STX1A-203ENST00000395155 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
STX1A-203ENST00000395155 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
STX1A-203ENST00000395155 CECR2Q9BXF3 1484 aa30.46■■■□□ 2.47
STX1A-203ENST00000395155 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
STX1A-203ENST00000395155 ATAD2BQ9ULI0 1458 aa29.46■■■□□ 2.31
STX1A-203ENST00000395155 SMARCA4P51532 1647 aa29.41■■■□□ 2.3
STX1A-203ENST00000395155 SMARCA2P51531 1590 aa29.39■■■□□ 2.29
STX1A-203ENST00000395155 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
STX1A-203ENST00000395155 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
STX1A-203ENST00000395155 ERCC6Q03468 1493 aa29.2■■■□□ 2.26
STX1A-203ENST00000395155 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
STX1A-203ENST00000395155 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
STX1A-203ENST00000395155 CUX2O14529 1486 aa29.13■■■□□ 2.25
STX1A-203ENST00000395155 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
STX1A-203ENST00000395155 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
STX1A-203ENST00000395155 NESP48681 1621 aa29.03■■■□□ 2.24
STX1A-203ENST00000395155 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
STX1A-203ENST00000395155 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
STX1A-203ENST00000395155 THOC2Q8NI27 1593 aaKnown RBP28.7■■■□□ 2.18
STX1A-203ENST00000395155 WIZO95785 1651 aa28.69■■■□□ 2.18
STX1A-203ENST00000395155 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
STX1A-203ENST00000395155 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
STX1A-203ENST00000395155 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
STX1A-203ENST00000395155 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
STX1A-203ENST00000395155 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
STX1A-203ENST00000395155 WDR62O43379 1518 aa28.36■■■□□ 2.13
STX1A-203ENST00000395155 CFTRP13569 1480 aa28.34■■■□□ 2.13
STX1A-203ENST00000395155 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
STX1A-203ENST00000395155 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
STX1A-203ENST00000395155 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
STX1A-203ENST00000395155 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
STX1A-203ENST00000395155 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
STX1A-203ENST00000395155 OSCARQ8IYS5 282 aa27.86■■■□□ 2.05
STX1A-203ENST00000395155 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
STX1A-203ENST00000395155 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
STX1A-203ENST00000395155 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
STX1A-203ENST00000395155 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
STX1A-203ENST00000395155 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
STX1A-203ENST00000395155 DNMBPQ6XZF7 1577 aa27.68■■■□□ 2.02
STX1A-203ENST00000395155 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
STX1A-203ENST00000395155 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
STX1A-203ENST00000395155 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
STX1A-203ENST00000395155 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.992e-6■■■■■ 26.9
STX1A-203ENST00000395155 SOGA1O94964 1423 aa27.41■■□□□ 1.98
STX1A-203ENST00000395155 RAD54L2Q9Y4B4 1467 aa27.4■■□□□ 1.98
STX1A-203ENST00000395155 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
STX1A-203ENST00000395155 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
STX1A-203ENST00000395155 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
STX1A-203ENST00000395155 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
STX1A-203ENST00000395155 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
STX1A-203ENST00000395155 FBLN2P98095 1184 aa27.34■■□□□ 1.97
STX1A-203ENST00000395155 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
STX1A-203ENST00000395155 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
STX1A-203ENST00000395155 CUX1P39880 1505 aa27.31■■□□□ 1.96
STX1A-203ENST00000395155 CHD1O14646 1710 aa27.3■■□□□ 1.96
STX1A-203ENST00000395155 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
STX1A-203ENST00000395155 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
STX1A-203ENST00000395155 CYB5RLQ6IPT4 315 aa27.19■■□□□ 1.94
STX1A-203ENST00000395155 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
STX1A-203ENST00000395155 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
STX1A-203ENST00000395155 MAGI1Q96QZ7 1491 aaPredicted RBP27.15■■□□□ 1.94
STX1A-203ENST00000395155 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
STX1A-203ENST00000395155 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
STX1A-203ENST00000395155 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
STX1A-203ENST00000395155 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
STX1A-203ENST00000395155 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
STX1A-203ENST00000395155 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
STX1A-203ENST00000395155 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
STX1A-203ENST00000395155 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
STX1A-203ENST00000395155 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
STX1A-203ENST00000395155 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
STX1A-203ENST00000395155 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
STX1A-203ENST00000395155 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
STX1A-203ENST00000395155 GRIN2AQ12879 1464 aa26.8■■□□□ 1.88
STX1A-203ENST00000395155 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
STX1A-203ENST00000395155 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
STX1A-203ENST00000395155 NUP160Q12769 1436 aa26.71■■□□□ 1.87
STX1A-203ENST00000395155 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.86
STX1A-203ENST00000395155 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
STX1A-203ENST00000395155 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
STX1A-203ENST00000395155 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
STX1A-203ENST00000395155 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
STX1A-203ENST00000395155 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
STX1A-203ENST00000395155 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
STX1A-203ENST00000395155 IGF1RP08069 1367 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms