Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
KNTC1P50748 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.29□□□□□ -0.28
KNTC1P50748 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.29□□□□□ -0.28
KNTC1P50748 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
KNTC1P50748 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KNTC1P50748 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 SHMT1P1-201ENST00000419974 1312 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 FDPSP7-201ENST00000429043 1054 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 AL136084.1-201ENST00000449172 318 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 RPSAP70-201ENST00000504462 864 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 AL359219.1-201ENST00000556311 934 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 GRAMD4P6-201ENST00000556999 244 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 AC015909.5-201ENST00000624336 2266 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 RN7SL578P-201ENST00000477781 283 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 RNA5SP420-201ENST00000516997 137 ntBASIC13.28□□□□□ -0.28
KNTC1P50748 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.28□□□□□ -0.28
KNTC1P50748 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.28□□□□□ -0.28
KNTC1P50748 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.28□□□□□ -0.28
KNTC1P50748 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.28□□□□□ -0.28
KNTC1P50748 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KNTC1P50748 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.27□□□□□ -0.28
KNTC1P50748 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
KNTC1P50748 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
KNTC1P50748 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
KNTC1P50748 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
KNTC1P50748 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
KNTC1P50748 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.27□□□□□ -0.28
KNTC1P50748 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KNTC1P50748 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
KNTC1P50748 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms