RNA–Protein interactions for RNA: ENST00000355697.6

SFXN4-201, Transcript of sideroflexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN4, Length 1,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-201ENST00000355697 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
SFXN4-201ENST00000355697 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
SFXN4-201ENST00000355697 ABCC9O60706 1549 aa27.96■■■□□ 2.07
SFXN4-201ENST00000355697 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
SFXN4-201ENST00000355697 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
SFXN4-201ENST00000355697 NACADO15069 1562 aa27.09■■□□□ 1.93
SFXN4-201ENST00000355697 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
SFXN4-201ENST00000355697 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
SFXN4-201ENST00000355697 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
SFXN4-201ENST00000355697 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
SFXN4-201ENST00000355697 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
SFXN4-201ENST00000355697 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
SFXN4-201ENST00000355697 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
SFXN4-201ENST00000355697 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
SFXN4-201ENST00000355697 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
SFXN4-201ENST00000355697 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
SFXN4-201ENST00000355697 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
SFXN4-201ENST00000355697 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
SFXN4-201ENST00000355697 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
SFXN4-201ENST00000355697 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
SFXN4-201ENST00000355697 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
SFXN4-201ENST00000355697 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
SFXN4-201ENST00000355697 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
SFXN4-201ENST00000355697 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
SFXN4-201ENST00000355697 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
SFXN4-201ENST00000355697 PEG3Q9GZU2 1588 aa25■■□□□ 1.59
SFXN4-201ENST00000355697 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
SFXN4-201ENST00000355697 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
SFXN4-201ENST00000355697 WIZO95785 1651 aa24.91■■□□□ 1.58
SFXN4-201ENST00000355697 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
SFXN4-201ENST00000355697 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
SFXN4-201ENST00000355697 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
SFXN4-201ENST00000355697 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
SFXN4-201ENST00000355697 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
SFXN4-201ENST00000355697 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
SFXN4-201ENST00000355697 NESP48681 1621 aa24.26■■□□□ 1.47
SFXN4-201ENST00000355697 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
SFXN4-201ENST00000355697 CFTRP13569 1480 aa24.18■■□□□ 1.46
SFXN4-201ENST00000355697 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
SFXN4-201ENST00000355697 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
SFXN4-201ENST00000355697 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SFXN4-201ENST00000355697 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
SFXN4-201ENST00000355697 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
SFXN4-201ENST00000355697 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
SFXN4-201ENST00000355697 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
SFXN4-201ENST00000355697 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
SFXN4-201ENST00000355697 WDR62O43379 1518 aa23.75■■□□□ 1.39
SFXN4-201ENST00000355697 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
SFXN4-201ENST00000355697 CUX2O14529 1486 aa23.71■■□□□ 1.39
SFXN4-201ENST00000355697 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
SFXN4-201ENST00000355697 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
SFXN4-201ENST00000355697 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
SFXN4-201ENST00000355697 CUX1P39880 1505 aa23.57■■□□□ 1.36
SFXN4-201ENST00000355697 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
SFXN4-201ENST00000355697 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
SFXN4-201ENST00000355697 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
SFXN4-201ENST00000355697 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
SFXN4-201ENST00000355697 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
SFXN4-201ENST00000355697 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
SFXN4-201ENST00000355697 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
SFXN4-201ENST00000355697 SOGA1O94964 1423 aa23.37■■□□□ 1.33
SFXN4-201ENST00000355697 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
SFXN4-201ENST00000355697 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
SFXN4-201ENST00000355697 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.31
SFXN4-201ENST00000355697 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
SFXN4-201ENST00000355697 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
SFXN4-201ENST00000355697 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
SFXN4-201ENST00000355697 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
SFXN4-201ENST00000355697 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
SFXN4-201ENST00000355697 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.39e-7■■■□□ 17.8
SFXN4-201ENST00000355697 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
SFXN4-201ENST00000355697 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
SFXN4-201ENST00000355697 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
SFXN4-201ENST00000355697 GRIN2BQ13224 1484 aa23.08■■□□□ 1.28
SFXN4-201ENST00000355697 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
SFXN4-201ENST00000355697 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
SFXN4-201ENST00000355697 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
SFXN4-201ENST00000355697 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
SFXN4-201ENST00000355697 PHF23Q9BUL5 403 aaPredicted RBP22.95■■□□□ 1.26
SFXN4-201ENST00000355697 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
SFXN4-201ENST00000355697 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
SFXN4-201ENST00000355697 CHD1O14646 1710 aa22.89■■□□□ 1.26
SFXN4-201ENST00000355697 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.25
SFXN4-201ENST00000355697 FBLN2P98095 1184 aa22.89■■□□□ 1.25
SFXN4-201ENST00000355697 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
SFXN4-201ENST00000355697 IGF1RP08069 1367 aa22.87■■□□□ 1.25
SFXN4-201ENST00000355697 CUL7Q14999 1698 aa22.86■■□□□ 1.25
SFXN4-201ENST00000355697 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
SFXN4-201ENST00000355697 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
SFXN4-201ENST00000355697 EEA1Q15075 1411 aa22.83■■□□□ 1.25
SFXN4-201ENST00000355697 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
SFXN4-201ENST00000355697 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
SFXN4-201ENST00000355697 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
SFXN4-201ENST00000355697 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
SFXN4-201ENST00000355697 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
SFXN4-201ENST00000355697 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
SFXN4-201ENST00000355697 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
SFXN4-201ENST00000355697 NUP160Q12769 1436 aa22.64■■□□□ 1.22
SFXN4-201ENST00000355697 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
SFXN4-201ENST00000355697 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms