RNA–Protein interactions for RNA: ENST00000556999.1

GRAMD4P6-201, Transcript of GRAM domain containing 4 pseudogene 6, humanhuman

BASIC

Gene GRAMD4P6, Length 244 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P6-201ENST00000556999 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
GRAMD4P6-201ENST00000556999 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
GRAMD4P6-201ENST00000556999 ABCC9O60706 1549 aa28.38■■■□□ 2.13
GRAMD4P6-201ENST00000556999 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
GRAMD4P6-201ENST00000556999 NACADO15069 1562 aa27.22■■□□□ 1.95
GRAMD4P6-201ENST00000556999 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
GRAMD4P6-201ENST00000556999 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
GRAMD4P6-201ENST00000556999 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
GRAMD4P6-201ENST00000556999 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
GRAMD4P6-201ENST00000556999 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
GRAMD4P6-201ENST00000556999 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
GRAMD4P6-201ENST00000556999 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.82
GRAMD4P6-201ENST00000556999 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
GRAMD4P6-201ENST00000556999 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
GRAMD4P6-201ENST00000556999 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
GRAMD4P6-201ENST00000556999 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
GRAMD4P6-201ENST00000556999 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
GRAMD4P6-201ENST00000556999 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
GRAMD4P6-201ENST00000556999 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
GRAMD4P6-201ENST00000556999 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
GRAMD4P6-201ENST00000556999 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
GRAMD4P6-201ENST00000556999 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
GRAMD4P6-201ENST00000556999 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
GRAMD4P6-201ENST00000556999 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
GRAMD4P6-201ENST00000556999 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
GRAMD4P6-201ENST00000556999 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
GRAMD4P6-201ENST00000556999 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
GRAMD4P6-201ENST00000556999 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
GRAMD4P6-201ENST00000556999 CUX2O14529 1486 aa24.54■■□□□ 1.52
GRAMD4P6-201ENST00000556999 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
GRAMD4P6-201ENST00000556999 NESP48681 1621 aa24.43■■□□□ 1.5
GRAMD4P6-201ENST00000556999 WIZO95785 1651 aa24.42■■□□□ 1.5
GRAMD4P6-201ENST00000556999 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
GRAMD4P6-201ENST00000556999 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
GRAMD4P6-201ENST00000556999 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
GRAMD4P6-201ENST00000556999 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
GRAMD4P6-201ENST00000556999 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
GRAMD4P6-201ENST00000556999 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
GRAMD4P6-201ENST00000556999 CFTRP13569 1480 aa24.11■■□□□ 1.45
GRAMD4P6-201ENST00000556999 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
GRAMD4P6-201ENST00000556999 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
GRAMD4P6-201ENST00000556999 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
GRAMD4P6-201ENST00000556999 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
GRAMD4P6-201ENST00000556999 WDR62O43379 1518 aa24.01■■□□□ 1.43
GRAMD4P6-201ENST00000556999 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
GRAMD4P6-201ENST00000556999 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
GRAMD4P6-201ENST00000556999 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
GRAMD4P6-201ENST00000556999 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
GRAMD4P6-201ENST00000556999 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
GRAMD4P6-201ENST00000556999 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
GRAMD4P6-201ENST00000556999 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
GRAMD4P6-201ENST00000556999 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
GRAMD4P6-201ENST00000556999 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
GRAMD4P6-201ENST00000556999 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
GRAMD4P6-201ENST00000556999 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
GRAMD4P6-201ENST00000556999 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
GRAMD4P6-201ENST00000556999 EIF4G3O43432 1585 aaKnown RBP23.32■■□□□ 1.32
GRAMD4P6-201ENST00000556999 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
GRAMD4P6-201ENST00000556999 SOGA1O94964 1423 aa23.25■■□□□ 1.31
GRAMD4P6-201ENST00000556999 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
GRAMD4P6-201ENST00000556999 CUX1P39880 1505 aa23.23■■□□□ 1.31
GRAMD4P6-201ENST00000556999 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
GRAMD4P6-201ENST00000556999 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
GRAMD4P6-201ENST00000556999 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
GRAMD4P6-201ENST00000556999 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
GRAMD4P6-201ENST00000556999 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
GRAMD4P6-201ENST00000556999 CHD1O14646 1710 aa23.07■■□□□ 1.28
GRAMD4P6-201ENST00000556999 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
GRAMD4P6-201ENST00000556999 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
GRAMD4P6-201ENST00000556999 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
GRAMD4P6-201ENST00000556999 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
GRAMD4P6-201ENST00000556999 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
GRAMD4P6-201ENST00000556999 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
GRAMD4P6-201ENST00000556999 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
GRAMD4P6-201ENST00000556999 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
GRAMD4P6-201ENST00000556999 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
GRAMD4P6-201ENST00000556999 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
GRAMD4P6-201ENST00000556999 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
GRAMD4P6-201ENST00000556999 FBLN2P98095 1184 aa22.98■■□□□ 1.27
GRAMD4P6-201ENST00000556999 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
GRAMD4P6-201ENST00000556999 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
GRAMD4P6-201ENST00000556999 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
GRAMD4P6-201ENST00000556999 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
GRAMD4P6-201ENST00000556999 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
GRAMD4P6-201ENST00000556999 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
GRAMD4P6-201ENST00000556999 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
GRAMD4P6-201ENST00000556999 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
GRAMD4P6-201ENST00000556999 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
GRAMD4P6-201ENST00000556999 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
GRAMD4P6-201ENST00000556999 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
GRAMD4P6-201ENST00000556999 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
GRAMD4P6-201ENST00000556999 NUP160Q12769 1436 aa22.68■■□□□ 1.22
GRAMD4P6-201ENST00000556999 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
GRAMD4P6-201ENST00000556999 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
GRAMD4P6-201ENST00000556999 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
GRAMD4P6-201ENST00000556999 CUL7Q14999 1698 aa22.52■■□□□ 1.2
GRAMD4P6-201ENST00000556999 IGF1RP08069 1367 aa22.49■■□□□ 1.19
GRAMD4P6-201ENST00000556999 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
GRAMD4P6-201ENST00000556999 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
GRAMD4P6-201ENST00000556999 ERCC6L2Q5T890 1561 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms