Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MEX3B-202ENST00000558133 4333 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 MARK2P16-201ENST00000605714 1723 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CNOT4O95628 AC026316.1-201ENST00000398900 414 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 AC006987.1-201ENST00000413610 527 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 RPS9P1-201ENST00000419943 583 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 RN7SL67P-201ENST00000492147 296 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 CHCHD2P2-201ENST00000503744 321 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 GOLGA2P8-201ENST00000505201 779 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.57□□□□□ -0.4
CNOT4O95628 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.57□□□□□ -0.4
CNOT4O95628 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 AC073352.2-201ENST00000609385 439 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 RN7SL736P-201ENST00000613111 269 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 AC103691.2-201ENST00000618824 433 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 AC011491.1-203ENST00000637688 543 ntBASIC12.57□□□□□ -0.4
CNOT4O95628 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.57□□□□□ -0.4
CNOT4O95628 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.57□□□□□ -0.4
CNOT4O95628 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CNOT4O95628 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CNOT4O95628 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CNOT4O95628 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.56□□□□□ -0.4
CNOT4O95628 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CNOT4O95628 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CNOT4O95628 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 BRD7P5-201ENST00000299197 1822 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 AL022313.4-201ENST00000562756 2046 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 KRT17P5-201ENST00000332088 839 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.56□□□□□ -0.4
CNOT4O95628 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNOT4O95628 MIR557-201ENST00000385239 98 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CNOT4O95628 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
CNOT4O95628 HMGA1P1-201ENST00000415560 1062 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 AL355334.1-201ENST00000417713 215 ntBASIC12.56□□□□□ -0.4
CNOT4O95628 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.56□□□□□ -0.4
CNOT4O95628 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.56□□□□□ -0.4
CNOT4O95628 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.56□□□□□ -0.4
CNOT4O95628 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.56□□□□□ -0.4
CNOT4O95628 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.56□□□□□ -0.4
CNOT4O95628 AP000358.1-201ENST00000456260 156 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms