RNA–Protein interactions for RNA: ENST00000453196.5

NIN-206, Transcript of ninein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NIN, Length 6,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-206ENST00000453196 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
NIN-206ENST00000453196 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
NIN-206ENST00000453196 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
NIN-206ENST00000453196 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
NIN-206ENST00000453196 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
NIN-206ENST00000453196 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
NIN-206ENST00000453196 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
NIN-206ENST00000453196 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
NIN-206ENST00000453196 APLP2Q06481 763 aa20.84■□□□□ 0.93
NIN-206ENST00000453196 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
NIN-206ENST00000453196 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
NIN-206ENST00000453196 ATP1B4Q9UN42 357 aaPredicted RBP20.42■□□□□ 0.86
NIN-206ENST00000453196 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
NIN-206ENST00000453196 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
NIN-206ENST00000453196 PPARGC1BQ86YN6 1023 aaKnown RBP20.31■□□□□ 0.84
NIN-206ENST00000453196 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
NIN-206ENST00000453196 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
NIN-206ENST00000453196 CENPBP07199 599 aaPredicted RBP20.14■□□□□ 0.81
NIN-206ENST00000453196 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
NIN-206ENST00000453196 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
NIN-206ENST00000453196 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
NIN-206ENST00000453196 ITGAEP38570 1179 aa19.81■□□□□ 0.76
NIN-206ENST00000453196 NEFLP07196 543 aa19.75■□□□□ 0.75
NIN-206ENST00000453196 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
NIN-206ENST00000453196 CNGB1Q14028 1251 aaPredicted RBP19.66■□□□□ 0.74
NIN-206ENST00000453196 POLR3GLQ9BT43 218 aa19.65■□□□□ 0.74
NIN-206ENST00000453196 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
NIN-206ENST00000453196 HRCP23327 699 aa19.58■□□□□ 0.73
NIN-206ENST00000453196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
NIN-206ENST00000453196 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
NIN-206ENST00000453196 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
NIN-206ENST00000453196 MYT1Q01538 1121 aa19.29■□□□□ 0.68
NIN-206ENST00000453196 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
NIN-206ENST00000453196 DAXXQ9UER7 740 aaPredicted RBP19.18■□□□□ 0.66
NIN-206ENST00000453196 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
NIN-206ENST00000453196 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
NIN-206ENST00000453196 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
NIN-206ENST00000453196 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
NIN-206ENST00000453196 TRIM52Q96A61 297 aa19■□□□□ 0.63
NIN-206ENST00000453196 BCANQ96GW7 911 aa19■□□□□ 0.63
NIN-206ENST00000453196 ABCC9O60706 1549 aa18.95■□□□□ 0.62
NIN-206ENST00000453196 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
NIN-206ENST00000453196 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
NIN-206ENST00000453196 GTF3C3Q9Y5Q9 886 aa18.83■□□□□ 0.61
NIN-206ENST00000453196 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
NIN-206ENST00000453196 FBLN2P98095 1184 aa18.79■□□□□ 0.6
NIN-206ENST00000453196 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
NIN-206ENST00000453196 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
NIN-206ENST00000453196 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
NIN-206ENST00000453196 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
NIN-206ENST00000453196 ANP32CO43423 234 aa18.67■□□□□ 0.58
NIN-206ENST00000453196 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
NIN-206ENST00000453196 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
NIN-206ENST00000453196 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
NIN-206ENST00000453196 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
NIN-206ENST00000453196 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
NIN-206ENST00000453196 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
NIN-206ENST00000453196 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
NIN-206ENST00000453196 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
NIN-206ENST00000453196 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
NIN-206ENST00000453196 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
NIN-206ENST00000453196 FKBP8Q14318 412 aa18.29■□□□□ 0.52
NIN-206ENST00000453196 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
NIN-206ENST00000453196 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
NIN-206ENST00000453196 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
NIN-206ENST00000453196 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
NIN-206ENST00000453196 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
NIN-206ENST00000453196 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
NIN-206ENST00000453196 NEFMP07197 916 aa18.2■□□□□ 0.5
NIN-206ENST00000453196 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
NIN-206ENST00000453196 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
NIN-206ENST00000453196 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
NIN-206ENST00000453196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■□□ 16.6
NIN-206ENST00000453196 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
NIN-206ENST00000453196 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
NIN-206ENST00000453196 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
NIN-206ENST00000453196 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
NIN-206ENST00000453196 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
NIN-206ENST00000453196 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
NIN-206ENST00000453196 MIER1Q8N108 512 aa18.02■□□□□ 0.47
NIN-206ENST00000453196 NBR1Q14596 966 aa17.99■□□□□ 0.47
NIN-206ENST00000453196 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
NIN-206ENST00000453196 ARXQ96QS3 562 aa17.98■□□□□ 0.47
NIN-206ENST00000453196 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
NIN-206ENST00000453196 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.46
NIN-206ENST00000453196 EIF5BO60841 1220 aaKnown RBP17.95■□□□□ 0.46
NIN-206ENST00000453196 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
NIN-206ENST00000453196 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
NIN-206ENST00000453196 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
NIN-206ENST00000453196 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
NIN-206ENST00000453196 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
NIN-206ENST00000453196 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
NIN-206ENST00000453196 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
NIN-206ENST00000453196 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
NIN-206ENST00000453196 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
NIN-206ENST00000453196 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
NIN-206ENST00000453196 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.45
NIN-206ENST00000453196 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
NIN-206ENST00000453196 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
NIN-206ENST00000453196 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms