Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 KRT8P1-201ENST00000557533 1207 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AC140658.4-201ENST00000561990 352 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 CICP16-201ENST00000502609 2813 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AC073869.2-201ENST00000417338 1026 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AC130709.1-201ENST00000484779 1212 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 RN7SL818P-201ENST00000485099 259 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 RN7SL81P-201ENST00000493781 261 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 ALG1L13P-202ENST00000519320 584 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 RN7SL725P-201ENST00000606439 259 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AC009560.1-201ENST00000620208 434 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 KRT8P24-201ENST00000560290 1559 ntBASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA1Q9UND3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 AC005840.4-201ENST00000541242 2494 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms