Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC005632.3-201ENST00000605544 308 ntBASIC13.49□□□□□ -0.25
RNF44Q7L0R7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.49□□□□□ -0.25
RNF44Q7L0R7 KRT8P43-201ENST00000406052 1458 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 TEKT4P2-202ENST00000559466 1312 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AK2P2-201ENST00000439142 405 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 MIR4522-201ENST00000584932 87 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 SIGLEC22P-201ENST00000599104 714 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC103810.10-201ENST00000606504 343 ntBASIC13.48□□□□□ -0.25
RNF44Q7L0R7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RNF44Q7L0R7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC026316.1-201ENST00000398900 414 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AL512306.1-201ENST00000432698 848 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms