Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AC106760.1-201ENST00000508690 800 ntBASIC17.33■□□□□ 0.36
UPF2Q9HAU5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AP003171.2-201ENST00000528208 925 ntBASIC17.33■□□□□ 0.36
UPF2Q9HAU5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AC020917.4-201ENST00000623994 1999 ntBASIC17.33■□□□□ 0.36
UPF2Q9HAU5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
UPF2Q9HAU5 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AL354989.2-201ENST00000435838 1540 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AC103592.1-201ENST00000394513 664 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ST13P19-201ENST00000442505 1124 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 COX5BP1-201ENST00000507622 393 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 MIR5189-201ENST00000577370 114 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 RN7SL713P-201ENST00000582127 302 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AL136301.1-201ENST00000615830 422 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 AC002350.2-201ENST00000623894 1828 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 SHC1P1-201ENST00000425230 1745 ntBASIC17.32■□□□□ 0.36
UPF2Q9HAU5 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF2Q9HAU5 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC17.31■□□□□ 0.36
UPF2Q9HAU5 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms