RNA–Protein interactions for RNA: ENST00000272164.5

WNT9A-201, Transcript of Wnt family member 9A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WNT9A, Length 3,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WNT9A-201ENST00000272164 NISCHQ9Y2I1 1504 aa25.25■■□□□ 1.63
WNT9A-201ENST00000272164 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
WNT9A-201ENST00000272164 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
WNT9A-201ENST00000272164 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
WNT9A-201ENST00000272164 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
WNT9A-201ENST00000272164 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
WNT9A-201ENST00000272164 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
WNT9A-201ENST00000272164 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
WNT9A-201ENST00000272164 HRCP23327 699 aa21.31■■□□□ 1
WNT9A-201ENST00000272164 LOC105371045A0A1W2PR82 267 aa21.18■□□□□ 0.98
WNT9A-201ENST00000272164 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
WNT9A-201ENST00000272164 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
WNT9A-201ENST00000272164 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
WNT9A-201ENST00000272164 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
WNT9A-201ENST00000272164 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.92
WNT9A-201ENST00000272164 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
WNT9A-201ENST00000272164 ABCC9O60706 1549 aa20.79■□□□□ 0.92
WNT9A-201ENST00000272164 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
WNT9A-201ENST00000272164 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
WNT9A-201ENST00000272164 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
WNT9A-201ENST00000272164 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
WNT9A-201ENST00000272164 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
WNT9A-201ENST00000272164 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
WNT9A-201ENST00000272164 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
WNT9A-201ENST00000272164 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
WNT9A-201ENST00000272164 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
WNT9A-201ENST00000272164 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
WNT9A-201ENST00000272164 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
WNT9A-201ENST00000272164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
WNT9A-201ENST00000272164 APLP2Q06481 763 aa20.19■□□□□ 0.82
WNT9A-201ENST00000272164 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
WNT9A-201ENST00000272164 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
WNT9A-201ENST00000272164 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
WNT9A-201ENST00000272164 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
WNT9A-201ENST00000272164 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
WNT9A-201ENST00000272164 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
WNT9A-201ENST00000272164 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
WNT9A-201ENST00000272164 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
WNT9A-201ENST00000272164 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
WNT9A-201ENST00000272164 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
WNT9A-201ENST00000272164 ACIN1Q9UKV3 1341 aaKnown RBP19.75■□□□□ 0.75
WNT9A-201ENST00000272164 NACADO15069 1562 aa19.75■□□□□ 0.75
WNT9A-201ENST00000272164 ITGAEP38570 1179 aa19.7■□□□□ 0.74
WNT9A-201ENST00000272164 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
WNT9A-201ENST00000272164 WIZO95785 1651 aa19.56■□□□□ 0.72
WNT9A-201ENST00000272164 MYT1Q01538 1121 aa19.54■□□□□ 0.72
WNT9A-201ENST00000272164 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
WNT9A-201ENST00000272164 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
WNT9A-201ENST00000272164 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
WNT9A-201ENST00000272164 SOGA1O94964 1423 aa19.45■□□□□ 0.7
WNT9A-201ENST00000272164 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
WNT9A-201ENST00000272164 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
WNT9A-201ENST00000272164 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
WNT9A-201ENST00000272164 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
WNT9A-201ENST00000272164 MIER1Q8N108 512 aa19.24■□□□□ 0.67
WNT9A-201ENST00000272164 FAM50AQ14320 339 aaKnown RBP19.23■□□□□ 0.67
WNT9A-201ENST00000272164 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
WNT9A-201ENST00000272164 CLIP1P30622 1438 aa19.22■□□□□ 0.67
WNT9A-201ENST00000272164 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
WNT9A-201ENST00000272164 NEFLP07196 543 aa19.2■□□□□ 0.66
WNT9A-201ENST00000272164 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
WNT9A-201ENST00000272164 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
WNT9A-201ENST00000272164 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
WNT9A-201ENST00000272164 EEA1Q15075 1411 aa19.13■□□□□ 0.65
WNT9A-201ENST00000272164 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
WNT9A-201ENST00000272164 BCANQ96GW7 911 aa19.1■□□□□ 0.65
WNT9A-201ENST00000272164 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
WNT9A-201ENST00000272164 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
WNT9A-201ENST00000272164 ARID3CA6NKF2 412 aa19■□□□□ 0.63
WNT9A-201ENST00000272164 SMARCA2P51531 1590 aa19■□□□□ 0.63
WNT9A-201ENST00000272164 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
WNT9A-201ENST00000272164 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
WNT9A-201ENST00000272164 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
WNT9A-201ENST00000272164 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
WNT9A-201ENST00000272164 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
WNT9A-201ENST00000272164 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.6
WNT9A-201ENST00000272164 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
WNT9A-201ENST00000272164 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
WNT9A-201ENST00000272164 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
WNT9A-201ENST00000272164 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
WNT9A-201ENST00000272164 FKBP8Q14318 412 aa18.77■□□□□ 0.6
WNT9A-201ENST00000272164 ANP32CO43423 234 aa18.75■□□□□ 0.59
WNT9A-201ENST00000272164 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
WNT9A-201ENST00000272164 CUX2O14529 1486 aa18.72■□□□□ 0.59
WNT9A-201ENST00000272164 FBLN2P98095 1184 aa18.71■□□□□ 0.59
WNT9A-201ENST00000272164 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
WNT9A-201ENST00000272164 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
WNT9A-201ENST00000272164 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
WNT9A-201ENST00000272164 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
WNT9A-201ENST00000272164 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
WNT9A-201ENST00000272164 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
WNT9A-201ENST00000272164 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
WNT9A-201ENST00000272164 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
WNT9A-201ENST00000272164 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
WNT9A-201ENST00000272164 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
WNT9A-201ENST00000272164 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
WNT9A-201ENST00000272164 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
WNT9A-201ENST00000272164 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
WNT9A-201ENST00000272164 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
WNT9A-201ENST00000272164 HNRNPUQ00839 825 aaKnown RBP eCLIP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms