RNA–Protein interactions for RNA: ENST00000444775.2

TRGV9-201, Transcript of T cell receptor gamma variable 9, humanhuman

APPRIS P1 BASIC

Gene TRGV9, Length 1,735 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9-201ENST00000444775 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
TRGV9-201ENST00000444775 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
TRGV9-201ENST00000444775 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
TRGV9-201ENST00000444775 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
TRGV9-201ENST00000444775 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
TRGV9-201ENST00000444775 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
TRGV9-201ENST00000444775 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
TRGV9-201ENST00000444775 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
TRGV9-201ENST00000444775 ABCC9O60706 1549 aa23.11■■□□□ 1.29
TRGV9-201ENST00000444775 NACADO15069 1562 aa23.06■■□□□ 1.28
TRGV9-201ENST00000444775 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
TRGV9-201ENST00000444775 SCRIBQ14160 1630 aa22.95■■□□□ 1.27
TRGV9-201ENST00000444775 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
TRGV9-201ENST00000444775 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
TRGV9-201ENST00000444775 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
TRGV9-201ENST00000444775 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
TRGV9-201ENST00000444775 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
TRGV9-201ENST00000444775 WIZO95785 1651 aa22.23■■□□□ 1.15
TRGV9-201ENST00000444775 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
TRGV9-201ENST00000444775 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
TRGV9-201ENST00000444775 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
TRGV9-201ENST00000444775 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
TRGV9-201ENST00000444775 LOC105371045A0A1W2PR82 267 aa22.06■■□□□ 1.12
TRGV9-201ENST00000444775 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
TRGV9-201ENST00000444775 HRCP23327 699 aa22.03■■□□□ 1.12
TRGV9-201ENST00000444775 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
TRGV9-201ENST00000444775 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
TRGV9-201ENST00000444775 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
TRGV9-201ENST00000444775 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
TRGV9-201ENST00000444775 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.08
TRGV9-201ENST00000444775 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
TRGV9-201ENST00000444775 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.06
TRGV9-201ENST00000444775 EEA1Q15075 1411 aa21.61■■□□□ 1.05
TRGV9-201ENST00000444775 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
TRGV9-201ENST00000444775 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
TRGV9-201ENST00000444775 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
TRGV9-201ENST00000444775 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
TRGV9-201ENST00000444775 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
TRGV9-201ENST00000444775 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
TRGV9-201ENST00000444775 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
TRGV9-201ENST00000444775 SOGA1O94964 1423 aa21.33■■□□□ 1
TRGV9-201ENST00000444775 HMGXB3Q12766 1538 aa21.32■■□□□ 1
TRGV9-201ENST00000444775 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
TRGV9-201ENST00000444775 GOLGA3Q08378 1498 aa21.29■■□□□ 1
TRGV9-201ENST00000444775 SYNJ1O43426 1573 aa21.27■■□□□ 1
TRGV9-201ENST00000444775 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
TRGV9-201ENST00000444775 KIF21BO75037 1637 aa21.26■□□□□ 0.99
TRGV9-201ENST00000444775 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
TRGV9-201ENST00000444775 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
TRGV9-201ENST00000444775 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
TRGV9-201ENST00000444775 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
TRGV9-201ENST00000444775 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
TRGV9-201ENST00000444775 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
TRGV9-201ENST00000444775 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
TRGV9-201ENST00000444775 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
TRGV9-201ENST00000444775 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
TRGV9-201ENST00000444775 CFTRP13569 1480 aa20.98■□□□□ 0.95
TRGV9-201ENST00000444775 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
TRGV9-201ENST00000444775 CLIP1P30622 1438 aa20.93■□□□□ 0.94
TRGV9-201ENST00000444775 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
TRGV9-201ENST00000444775 CUX1P39880 1505 aa20.89■□□□□ 0.93
TRGV9-201ENST00000444775 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
TRGV9-201ENST00000444775 PRXQ9BXM0 1461 aa20.87■□□□□ 0.93
TRGV9-201ENST00000444775 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
TRGV9-201ENST00000444775 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
TRGV9-201ENST00000444775 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
TRGV9-201ENST00000444775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
TRGV9-201ENST00000444775 APLP2Q06481 763 aa20.67■□□□□ 0.9
TRGV9-201ENST00000444775 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
TRGV9-201ENST00000444775 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
TRGV9-201ENST00000444775 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
TRGV9-201ENST00000444775 CUX2O14529 1486 aa20.54■□□□□ 0.88
TRGV9-201ENST00000444775 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
TRGV9-201ENST00000444775 IGF1RP08069 1367 aa20.51■□□□□ 0.87
TRGV9-201ENST00000444775 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
TRGV9-201ENST00000444775 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
TRGV9-201ENST00000444775 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
TRGV9-201ENST00000444775 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
TRGV9-201ENST00000444775 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
TRGV9-201ENST00000444775 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
TRGV9-201ENST00000444775 RRBP1Q9P2E9 1410 aaKnown RBP20.42■□□□□ 0.86
TRGV9-201ENST00000444775 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
TRGV9-201ENST00000444775 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
TRGV9-201ENST00000444775 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
TRGV9-201ENST00000444775 CUL7Q14999 1698 aa20.37■□□□□ 0.85
TRGV9-201ENST00000444775 HNRNPUL2Q1KMD3 747 aaKnown RBP20.36■□□□□ 0.85
TRGV9-201ENST00000444775 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
TRGV9-201ENST00000444775 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
TRGV9-201ENST00000444775 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
TRGV9-201ENST00000444775 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
TRGV9-201ENST00000444775 EFCAB5A4FU69 1503 aa20.31■□□□□ 0.84
TRGV9-201ENST00000444775 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
TRGV9-201ENST00000444775 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
TRGV9-201ENST00000444775 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
TRGV9-201ENST00000444775 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.83
TRGV9-201ENST00000444775 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
TRGV9-201ENST00000444775 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
TRGV9-201ENST00000444775 CTTNBP2Q8WZ74 1663 aa20.24■□□□□ 0.83
TRGV9-201ENST00000444775 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRGV9-201ENST00000444775 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms