Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CCL2P13500 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 AL133338.1-201ENST00000565695 1517 ntBASIC12.29□□□□□ -0.44
CCL2P13500 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 SLC25A24P2-201ENST00000415059 510 ntBASIC12.29□□□□□ -0.44
CCL2P13500 AC073869.2-201ENST00000417338 1026 ntBASIC12.29□□□□□ -0.44
CCL2P13500 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 AC026320.2-201ENST00000434379 478 ntBASIC12.29□□□□□ -0.44
CCL2P13500 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL2P13500 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 AC005740.1-201ENST00000515639 522 ntBASIC12.29□□□□□ -0.44
CCL2P13500 AC245884.6-201ENST00000515672 1067 ntBASIC12.29□□□□□ -0.44
CCL2P13500 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 MIR497HG-202ENST00000572453 3838 ntBASIC12.29□□□□□ -0.44
CCL2P13500 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CCL2P13500 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 MIR3619-201ENST00000579667 83 ntBASIC12.29□□□□□ -0.44
CCL2P13500 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 AC012044.1-201ENST00000603431 297 ntBASIC12.29□□□□□ -0.44
CCL2P13500 AL021707.6-201ENST00000609212 491 ntBASIC12.29□□□□□ -0.44
CCL2P13500 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 AC138627.1-207ENST00000641560 1006 ntBASIC12.29□□□□□ -0.44
CCL2P13500 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 AL139158.3-201ENST00000641212 1562 ntBASIC12.29□□□□□ -0.44
CCL2P13500 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL2P13500 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 AL591122.2-201ENST00000624125 1853 ntBASIC12.29□□□□□ -0.44
CCL2P13500 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL2P13500 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL2P13500 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL2P13500 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CCL2P13500 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL2P13500 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL2P13500 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms