Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 PUDPP3-201ENST00000445368 636 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 AC114812.1-204ENST00000449669 728 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 HLA-V-204ENST00000476601 1289 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 MEIS3P1-201ENST00000495167 958 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 AC092139.4-201ENST00000624318 2794 ntBASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SEC22CQ9BRL7 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 MCCD1P2-201ENST00000423228 335 ntBASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 HTR5BP-201ENST00000430851 1154 ntBASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AP001582.1-201ENST00000525856 295 ntBASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SEC22CQ9BRL7 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms