RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
CHGB-201ENST00000378961 CCDC180Q9P1Z9 1646 aa22.48■■□□□ 1.19
CHGB-201ENST00000378961 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
CHGB-201ENST00000378961 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
CHGB-201ENST00000378961 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
CHGB-201ENST00000378961 HRCP23327 699 aa21.51■■□□□ 1.03
CHGB-201ENST00000378961 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
CHGB-201ENST00000378961 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
CHGB-201ENST00000378961 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
CHGB-201ENST00000378961 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
CHGB-201ENST00000378961 ABCC9O60706 1549 aa21.16■□□□□ 0.98
CHGB-201ENST00000378961 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
CHGB-201ENST00000378961 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
CHGB-201ENST00000378961 NACADO15069 1562 aa20.92■□□□□ 0.94
CHGB-201ENST00000378961 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
CHGB-201ENST00000378961 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
CHGB-201ENST00000378961 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
CHGB-201ENST00000378961 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
CHGB-201ENST00000378961 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
CHGB-201ENST00000378961 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
CHGB-201ENST00000378961 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
CHGB-201ENST00000378961 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
CHGB-201ENST00000378961 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
CHGB-201ENST00000378961 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
CHGB-201ENST00000378961 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
CHGB-201ENST00000378961 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHGB-201ENST00000378961 WIZO95785 1651 aa20.14■□□□□ 0.81
CHGB-201ENST00000378961 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
CHGB-201ENST00000378961 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
CHGB-201ENST00000378961 SMARCA4P51532 1647 aa20■□□□□ 0.79
CHGB-201ENST00000378961 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
CHGB-201ENST00000378961 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
CHGB-201ENST00000378961 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
CHGB-201ENST00000378961 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
CHGB-201ENST00000378961 ACIN1Q9UKV3 1341 aaKnown RBP19.87■□□□□ 0.77
CHGB-201ENST00000378961 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
CHGB-201ENST00000378961 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
CHGB-201ENST00000378961 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
CHGB-201ENST00000378961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
CHGB-201ENST00000378961 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
CHGB-201ENST00000378961 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
CHGB-201ENST00000378961 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
CHGB-201ENST00000378961 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
CHGB-201ENST00000378961 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
CHGB-201ENST00000378961 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
CHGB-201ENST00000378961 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
CHGB-201ENST00000378961 MYT1Q01538 1121 aa19.54■□□□□ 0.72
CHGB-201ENST00000378961 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
CHGB-201ENST00000378961 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
CHGB-201ENST00000378961 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
CHGB-201ENST00000378961 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
CHGB-201ENST00000378961 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
CHGB-201ENST00000378961 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
CHGB-201ENST00000378961 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
CHGB-201ENST00000378961 SOGA1O94964 1423 aa19.26■□□□□ 0.67
CHGB-201ENST00000378961 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
CHGB-201ENST00000378961 EEA1Q15075 1411 aa19.18■□□□□ 0.66
CHGB-201ENST00000378961 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
CHGB-201ENST00000378961 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
CHGB-201ENST00000378961 MIER1Q8N108 512 aa19.15■□□□□ 0.66
CHGB-201ENST00000378961 ZNF316A6NFI3 1004 aaPredicted RBP19.1■□□□□ 0.65
CHGB-201ENST00000378961 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
CHGB-201ENST00000378961 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
CHGB-201ENST00000378961 CFTRP13569 1480 aa19.04■□□□□ 0.64
CHGB-201ENST00000378961 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
CHGB-201ENST00000378961 TOP2BQ02880 1626 aa19.02■□□□□ 0.63
CHGB-201ENST00000378961 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
CHGB-201ENST00000378961 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
CHGB-201ENST00000378961 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
CHGB-201ENST00000378961 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
CHGB-201ENST00000378961 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
CHGB-201ENST00000378961 CUX1P39880 1505 aa18.91■□□□□ 0.62
CHGB-201ENST00000378961 KIF21BO75037 1637 aa18.88■□□□□ 0.61
CHGB-201ENST00000378961 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
CHGB-201ENST00000378961 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
CHGB-201ENST00000378961 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
CHGB-201ENST00000378961 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
CHGB-201ENST00000378961 BCL11AQ9H165 835 aa18.8■□□□□ 0.6
CHGB-201ENST00000378961 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
CHGB-201ENST00000378961 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
CHGB-201ENST00000378961 CLIP1P30622 1438 aa18.75■□□□□ 0.59
CHGB-201ENST00000378961 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
CHGB-201ENST00000378961 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
CHGB-201ENST00000378961 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
CHGB-201ENST00000378961 ANP32EQ9BTT0 268 aa18.71■□□□□ 0.59
CHGB-201ENST00000378961 NESP48681 1621 aa18.69■□□□□ 0.58
CHGB-201ENST00000378961 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
CHGB-201ENST00000378961 CUX2O14529 1486 aa18.67■□□□□ 0.58
CHGB-201ENST00000378961 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
CHGB-201ENST00000378961 BCANQ96GW7 911 aa18.66■□□□□ 0.58
CHGB-201ENST00000378961 APLP2Q06481 763 aa18.62■□□□□ 0.57
CHGB-201ENST00000378961 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
CHGB-201ENST00000378961 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
CHGB-201ENST00000378961 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
CHGB-201ENST00000378961 IGF1RP08069 1367 aa18.59■□□□□ 0.57
CHGB-201ENST00000378961 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
CHGB-201ENST00000378961 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
CHGB-201ENST00000378961 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
CHGB-201ENST00000378961 CARMIL1Q5VZK9 1371 aa18.53■□□□□ 0.56
CHGB-201ENST00000378961 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms