RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
SYMPK-214ENST00000599814 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
SYMPK-214ENST00000599814 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
SYMPK-214ENST00000599814 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
SYMPK-214ENST00000599814 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
SYMPK-214ENST00000599814 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
SYMPK-214ENST00000599814 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
SYMPK-214ENST00000599814 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
SYMPK-214ENST00000599814 APLP2Q06481 763 aa20.42■□□□□ 0.86
SYMPK-214ENST00000599814 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
SYMPK-214ENST00000599814 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
SYMPK-214ENST00000599814 TTBK1Q5TCY1 1321 aaPredicted RBP20.29■□□□□ 0.84
SYMPK-214ENST00000599814 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
SYMPK-214ENST00000599814 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
SYMPK-214ENST00000599814 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
SYMPK-214ENST00000599814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
SYMPK-214ENST00000599814 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
SYMPK-214ENST00000599814 MYT1Q01538 1121 aa19.91■□□□□ 0.78
SYMPK-214ENST00000599814 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
SYMPK-214ENST00000599814 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
SYMPK-214ENST00000599814 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■■□□□ 12.2
SYMPK-214ENST00000599814 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
SYMPK-214ENST00000599814 FBLN2P98095 1184 aa19.52■□□□□ 0.72
SYMPK-214ENST00000599814 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
SYMPK-214ENST00000599814 ABCC9O60706 1549 aa19.5■□□□□ 0.71
SYMPK-214ENST00000599814 NEFLP07196 543 aa19.48■□□□□ 0.71
SYMPK-214ENST00000599814 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
SYMPK-214ENST00000599814 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
SYMPK-214ENST00000599814 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
SYMPK-214ENST00000599814 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
SYMPK-214ENST00000599814 BCANQ96GW7 911 aa19.22■□□□□ 0.67
SYMPK-214ENST00000599814 POLR3GLQ9BT43 218 aa19.19■□□□□ 0.66
SYMPK-214ENST00000599814 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
SYMPK-214ENST00000599814 ESF1Q9H501 851 aaKnown RBP19.06■□□□□ 0.64
SYMPK-214ENST00000599814 ITGAEP38570 1179 aa19■□□□□ 0.63
SYMPK-214ENST00000599814 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
SYMPK-214ENST00000599814 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
SYMPK-214ENST00000599814 PPARGC1BQ86YN6 1023 aaKnown RBP18.89■□□□□ 0.61
SYMPK-214ENST00000599814 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
SYMPK-214ENST00000599814 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
SYMPK-214ENST00000599814 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
SYMPK-214ENST00000599814 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
SYMPK-214ENST00000599814 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
SYMPK-214ENST00000599814 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
SYMPK-214ENST00000599814 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.58
SYMPK-214ENST00000599814 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
SYMPK-214ENST00000599814 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
SYMPK-214ENST00000599814 HRCP23327 699 aa18.57■□□□□ 0.56
SYMPK-214ENST00000599814 A0A0G2JS52 829 aa18.57■□□□□ 0.56
SYMPK-214ENST00000599814 TRIM52Q96A61 297 aa18.52■□□□□ 0.55
SYMPK-214ENST00000599814 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
SYMPK-214ENST00000599814 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
SYMPK-214ENST00000599814 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.54
SYMPK-214ENST00000599814 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
SYMPK-214ENST00000599814 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
SYMPK-214ENST00000599814 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
SYMPK-214ENST00000599814 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
SYMPK-214ENST00000599814 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
SYMPK-214ENST00000599814 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
SYMPK-214ENST00000599814 C14orf37Q86TY3 774 aa18.35■□□□□ 0.53
SYMPK-214ENST00000599814 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
SYMPK-214ENST00000599814 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-214ENST00000599814 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-214ENST00000599814 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.51
SYMPK-214ENST00000599814 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
SYMPK-214ENST00000599814 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
SYMPK-214ENST00000599814 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
SYMPK-214ENST00000599814 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
SYMPK-214ENST00000599814 NEFMP07197 916 aa18.14■□□□□ 0.49
SYMPK-214ENST00000599814 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
SYMPK-214ENST00000599814 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
SYMPK-214ENST00000599814 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
SYMPK-214ENST00000599814 PPP1R15AO75807 674 aaPredicted RBP18.03■□□□□ 0.48
SYMPK-214ENST00000599814 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
SYMPK-214ENST00000599814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.487e-7■■■□□ 17.3
SYMPK-214ENST00000599814 NPM2Q86SE8 214 aaKnown RBP17.98■□□□□ 0.47
SYMPK-214ENST00000599814 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
SYMPK-214ENST00000599814 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
SYMPK-214ENST00000599814 ANP32CO43423 234 aa17.94■□□□□ 0.46
SYMPK-214ENST00000599814 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
SYMPK-214ENST00000599814 MLECQ14165 292 aa17.86■□□□□ 0.45
SYMPK-214ENST00000599814 LMOD2Q6P5Q4 547 aa17.86■□□□□ 0.45
SYMPK-214ENST00000599814 GLIPR1L2Q4G1C9 344 aa17.86■□□□□ 0.45
SYMPK-214ENST00000599814 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
SYMPK-214ENST00000599814 ANP32BQ92688 251 aaKnown RBP17.83■□□□□ 0.45
SYMPK-214ENST00000599814 ARXQ96QS3 562 aa17.8■□□□□ 0.44
SYMPK-214ENST00000599814 NPHP1O15259 732 aa17.79■□□□□ 0.44
SYMPK-214ENST00000599814 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-214ENST00000599814 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
SYMPK-214ENST00000599814 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
SYMPK-214ENST00000599814 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
SYMPK-214ENST00000599814 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
SYMPK-214ENST00000599814 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
SYMPK-214ENST00000599814 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
SYMPK-214ENST00000599814 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
SYMPK-214ENST00000599814 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
SYMPK-214ENST00000599814 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
SYMPK-214ENST00000599814 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
SYMPK-214ENST00000599814 FKBP8Q14318 412 aa17.48■□□□□ 0.39
SYMPK-214ENST00000599814 MEX3CQ5U5Q3 659 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms