Protein–RNA interactions for Protein: Q9Y3C8

UFC1, Ubiquitin-fold modifier-conjugating enzyme 1, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1Q9Y3C8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UFC1Q9Y3C8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 MBLAC2-202ENST00000514906 1936 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AL161932.2-201ENST00000435436 679 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AL645933.1-201ENST00000440087 609 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 FAM8A2P-201ENST00000528813 1142 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC133540.1-201ENST00000620845 1019 ntBASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UFC1Q9Y3C8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms