Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 RNA5SP359-201ENST00000364838 113 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PGAM1P11-201ENST00000416729 680 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CCND3P1-201ENST00000438347 580 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SEPHS2P1-201ENST00000511618 1162 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 HNRNPA1P72-201ENST00000529511 967 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 FOXN3-AS2-201ENST00000554071 1262 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 AC097359.3-201ENST00000603982 1210 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 MIR6720-201ENST00000611664 98 ntBASIC11.84□□□□□ -0.51
RIPPLY3P57055 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.84□□□□□ -0.51
RIPPLY3P57055 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RIPPLY3P57055 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
RIPPLY3P57055 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RIPPLY3P57055 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RIPPLY3P57055 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 PCGF3-213ENST00000620529 1899 ntBASIC11.83□□□□□ -0.52
RIPPLY3P57055 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 AC010491.1-201ENST00000563101 2797 ntBASIC11.83□□□□□ -0.52
RIPPLY3P57055 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RIPPLY3P57055 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RIPPLY3P57055 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms