RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
CCND3P1-201ENST00000438347 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
CCND3P1-201ENST00000438347 ABCC9O60706 1549 aa28.28■■■□□ 2.12
CCND3P1-201ENST00000438347 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
CCND3P1-201ENST00000438347 NACADO15069 1562 aa27.09■■□□□ 1.93
CCND3P1-201ENST00000438347 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
CCND3P1-201ENST00000438347 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
CCND3P1-201ENST00000438347 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
CCND3P1-201ENST00000438347 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
CCND3P1-201ENST00000438347 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
CCND3P1-201ENST00000438347 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
CCND3P1-201ENST00000438347 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
CCND3P1-201ENST00000438347 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
CCND3P1-201ENST00000438347 DNAJC5BQ9UF47 199 aa26.17■■□□□ 1.78
CCND3P1-201ENST00000438347 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
CCND3P1-201ENST00000438347 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
CCND3P1-201ENST00000438347 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
CCND3P1-201ENST00000438347 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
CCND3P1-201ENST00000438347 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
CCND3P1-201ENST00000438347 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
CCND3P1-201ENST00000438347 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
CCND3P1-201ENST00000438347 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
CCND3P1-201ENST00000438347 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
CCND3P1-201ENST00000438347 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
CCND3P1-201ENST00000438347 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
CCND3P1-201ENST00000438347 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
CCND3P1-201ENST00000438347 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CCND3P1-201ENST00000438347 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
CCND3P1-201ENST00000438347 WIZO95785 1651 aa24.56■■□□□ 1.52
CCND3P1-201ENST00000438347 NESP48681 1621 aa24.43■■□□□ 1.5
CCND3P1-201ENST00000438347 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
CCND3P1-201ENST00000438347 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
CCND3P1-201ENST00000438347 CUX2O14529 1486 aa24.33■■□□□ 1.49
CCND3P1-201ENST00000438347 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
CCND3P1-201ENST00000438347 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
CCND3P1-201ENST00000438347 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
CCND3P1-201ENST00000438347 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
CCND3P1-201ENST00000438347 CFTRP13569 1480 aa24.13■■□□□ 1.45
CCND3P1-201ENST00000438347 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
CCND3P1-201ENST00000438347 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
CCND3P1-201ENST00000438347 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
CCND3P1-201ENST00000438347 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
CCND3P1-201ENST00000438347 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
CCND3P1-201ENST00000438347 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
CCND3P1-201ENST00000438347 WDR62O43379 1518 aa23.88■■□□□ 1.41
CCND3P1-201ENST00000438347 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
CCND3P1-201ENST00000438347 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
CCND3P1-201ENST00000438347 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
CCND3P1-201ENST00000438347 ABCC8Q09428 1581 aa23.59■■□□□ 1.37
CCND3P1-201ENST00000438347 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
CCND3P1-201ENST00000438347 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
CCND3P1-201ENST00000438347 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
CCND3P1-201ENST00000438347 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
CCND3P1-201ENST00000438347 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
CCND3P1-201ENST00000438347 CUX1P39880 1505 aa23.37■■□□□ 1.33
CCND3P1-201ENST00000438347 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
CCND3P1-201ENST00000438347 SOGA1O94964 1423 aa23.31■■□□□ 1.32
CCND3P1-201ENST00000438347 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CCND3P1-201ENST00000438347 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
CCND3P1-201ENST00000438347 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
CCND3P1-201ENST00000438347 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
CCND3P1-201ENST00000438347 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
CCND3P1-201ENST00000438347 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
CCND3P1-201ENST00000438347 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
CCND3P1-201ENST00000438347 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
CCND3P1-201ENST00000438347 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
CCND3P1-201ENST00000438347 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
CCND3P1-201ENST00000438347 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
CCND3P1-201ENST00000438347 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
CCND3P1-201ENST00000438347 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
CCND3P1-201ENST00000438347 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
CCND3P1-201ENST00000438347 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
CCND3P1-201ENST00000438347 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
CCND3P1-201ENST00000438347 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
CCND3P1-201ENST00000438347 FBLN2P98095 1184 aa22.98■■□□□ 1.27
CCND3P1-201ENST00000438347 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
CCND3P1-201ENST00000438347 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
CCND3P1-201ENST00000438347 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
CCND3P1-201ENST00000438347 CHD1O14646 1710 aa22.89■■□□□ 1.26
CCND3P1-201ENST00000438347 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
CCND3P1-201ENST00000438347 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
CCND3P1-201ENST00000438347 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
CCND3P1-201ENST00000438347 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
CCND3P1-201ENST00000438347 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
CCND3P1-201ENST00000438347 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
CCND3P1-201ENST00000438347 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
CCND3P1-201ENST00000438347 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
CCND3P1-201ENST00000438347 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
CCND3P1-201ENST00000438347 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
CCND3P1-201ENST00000438347 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
CCND3P1-201ENST00000438347 IGF1RP08069 1367 aa22.68■■□□□ 1.22
CCND3P1-201ENST00000438347 NUP160Q12769 1436 aa22.67■■□□□ 1.22
CCND3P1-201ENST00000438347 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
CCND3P1-201ENST00000438347 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
CCND3P1-201ENST00000438347 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
CCND3P1-201ENST00000438347 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
CCND3P1-201ENST00000438347 CUL7Q14999 1698 aa22.49■■□□□ 1.19
CCND3P1-201ENST00000438347 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
CCND3P1-201ENST00000438347 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
CCND3P1-201ENST00000438347 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms