RNA–Protein interactions for RNA: ENST00000468879.1

IGKV1D-43-201, Transcript of immunoglobulin kappa variable 1D-43, humanhuman

APPRIS P1 BASIC

Gene IGKV1D-43, Length 532 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43-201ENST00000468879 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
IGKV1D-43-201ENST00000468879 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
IGKV1D-43-201ENST00000468879 ABCC9O60706 1549 aa29.26■■■□□ 2.27
IGKV1D-43-201ENST00000468879 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
IGKV1D-43-201ENST00000468879 NACADO15069 1562 aa27.98■■■□□ 2.07
IGKV1D-43-201ENST00000468879 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
IGKV1D-43-201ENST00000468879 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
IGKV1D-43-201ENST00000468879 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
IGKV1D-43-201ENST00000468879 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
IGKV1D-43-201ENST00000468879 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
IGKV1D-43-201ENST00000468879 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
IGKV1D-43-201ENST00000468879 BICRAQ9NZM4 1560 aa27.23■■□□□ 1.95
IGKV1D-43-201ENST00000468879 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
IGKV1D-43-201ENST00000468879 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
IGKV1D-43-201ENST00000468879 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
IGKV1D-43-201ENST00000468879 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
IGKV1D-43-201ENST00000468879 CC2D2AQ9P2K1 1620 aa26.49■■□□□ 1.83
IGKV1D-43-201ENST00000468879 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
IGKV1D-43-201ENST00000468879 SMARCA4P51532 1647 aa25.91■■□□□ 1.74
IGKV1D-43-201ENST00000468879 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
IGKV1D-43-201ENST00000468879 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
IGKV1D-43-201ENST00000468879 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
IGKV1D-43-201ENST00000468879 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
IGKV1D-43-201ENST00000468879 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
IGKV1D-43-201ENST00000468879 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
IGKV1D-43-201ENST00000468879 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.69
IGKV1D-43-201ENST00000468879 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
IGKV1D-43-201ENST00000468879 WIZO95785 1651 aa25.42■■□□□ 1.66
IGKV1D-43-201ENST00000468879 NESP48681 1621 aa25.27■■□□□ 1.64
IGKV1D-43-201ENST00000468879 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
IGKV1D-43-201ENST00000468879 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
IGKV1D-43-201ENST00000468879 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
IGKV1D-43-201ENST00000468879 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
IGKV1D-43-201ENST00000468879 CUX2O14529 1486 aa25.05■■□□□ 1.6
IGKV1D-43-201ENST00000468879 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
IGKV1D-43-201ENST00000468879 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
IGKV1D-43-201ENST00000468879 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
IGKV1D-43-201ENST00000468879 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
IGKV1D-43-201ENST00000468879 CFTRP13569 1480 aa24.84■■□□□ 1.57
IGKV1D-43-201ENST00000468879 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
IGKV1D-43-201ENST00000468879 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
IGKV1D-43-201ENST00000468879 PRDM2Q13029 1718 aa24.76■■□□□ 1.55
IGKV1D-43-201ENST00000468879 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
IGKV1D-43-201ENST00000468879 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
IGKV1D-43-201ENST00000468879 WDR62O43379 1518 aa24.7■■□□□ 1.54
IGKV1D-43-201ENST00000468879 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
IGKV1D-43-201ENST00000468879 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
IGKV1D-43-201ENST00000468879 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
IGKV1D-43-201ENST00000468879 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
IGKV1D-43-201ENST00000468879 ABCC8Q09428 1581 aa24.33■■□□□ 1.48
IGKV1D-43-201ENST00000468879 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
IGKV1D-43-201ENST00000468879 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
IGKV1D-43-201ENST00000468879 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
IGKV1D-43-201ENST00000468879 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
IGKV1D-43-201ENST00000468879 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
IGKV1D-43-201ENST00000468879 CUX1P39880 1505 aa24.1■■□□□ 1.45
IGKV1D-43-201ENST00000468879 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
IGKV1D-43-201ENST00000468879 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
IGKV1D-43-201ENST00000468879 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
IGKV1D-43-201ENST00000468879 SOGA1O94964 1423 aa24.01■■□□□ 1.43
IGKV1D-43-201ENST00000468879 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.43
IGKV1D-43-201ENST00000468879 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
IGKV1D-43-201ENST00000468879 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
IGKV1D-43-201ENST00000468879 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
IGKV1D-43-201ENST00000468879 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
IGKV1D-43-201ENST00000468879 CHD1O14646 1710 aa23.86■■□□□ 1.41
IGKV1D-43-201ENST00000468879 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
IGKV1D-43-201ENST00000468879 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
IGKV1D-43-201ENST00000468879 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
IGKV1D-43-201ENST00000468879 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
IGKV1D-43-201ENST00000468879 PBRM1Q86U86 1689 aa23.78■■□□□ 1.4
IGKV1D-43-201ENST00000468879 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
IGKV1D-43-201ENST00000468879 GRIN2BQ13224 1484 aa23.76■■□□□ 1.39
IGKV1D-43-201ENST00000468879 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
IGKV1D-43-201ENST00000468879 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
IGKV1D-43-201ENST00000468879 FBLN2P98095 1184 aa23.73■■□□□ 1.39
IGKV1D-43-201ENST00000468879 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
IGKV1D-43-201ENST00000468879 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
IGKV1D-43-201ENST00000468879 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
IGKV1D-43-201ENST00000468879 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
IGKV1D-43-201ENST00000468879 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
IGKV1D-43-201ENST00000468879 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
IGKV1D-43-201ENST00000468879 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
IGKV1D-43-201ENST00000468879 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
IGKV1D-43-201ENST00000468879 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
IGKV1D-43-201ENST00000468879 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
IGKV1D-43-201ENST00000468879 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
IGKV1D-43-201ENST00000468879 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
IGKV1D-43-201ENST00000468879 FHAD1B1AJZ9 1412 aa23.45■■□□□ 1.34
IGKV1D-43-201ENST00000468879 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
IGKV1D-43-201ENST00000468879 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
IGKV1D-43-201ENST00000468879 CYB5RLQ6IPT4 315 aa23.36■■□□□ 1.33
IGKV1D-43-201ENST00000468879 NUP160Q12769 1436 aa23.35■■□□□ 1.33
IGKV1D-43-201ENST00000468879 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
IGKV1D-43-201ENST00000468879 CUL7Q14999 1698 aa23.28■■□□□ 1.32
IGKV1D-43-201ENST00000468879 IGF1RP08069 1367 aa23.27■■□□□ 1.32
IGKV1D-43-201ENST00000468879 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
IGKV1D-43-201ENST00000468879 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
IGKV1D-43-201ENST00000468879 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
IGKV1D-43-201ENST00000468879 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms