RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
ABR-205ENST00000544583 NISCHQ9Y2I1 1504 aa25.26■■□□□ 1.63
ABR-205ENST00000544583 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
ABR-205ENST00000544583 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
ABR-205ENST00000544583 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
ABR-205ENST00000544583 APLP2Q06481 763 aa23.21■■□□□ 1.31
ABR-205ENST00000544583 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.29
ABR-205ENST00000544583 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.24
ABR-205ENST00000544583 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
ABR-205ENST00000544583 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
ABR-205ENST00000544583 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
ABR-205ENST00000544583 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
ABR-205ENST00000544583 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
ABR-205ENST00000544583 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
ABR-205ENST00000544583 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
ABR-205ENST00000544583 ABCC9O60706 1549 aa22.1■■□□□ 1.13
ABR-205ENST00000544583 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
ABR-205ENST00000544583 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
ABR-205ENST00000544583 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
ABR-205ENST00000544583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
ABR-205ENST00000544583 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
ABR-205ENST00000544583 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
ABR-205ENST00000544583 ITGAEP38570 1179 aa21.72■■□□□ 1.07
ABR-205ENST00000544583 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
ABR-205ENST00000544583 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
ABR-205ENST00000544583 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
ABR-205ENST00000544583 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
ABR-205ENST00000544583 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
ABR-205ENST00000544583 MYT1Q01538 1121 aa21.55■■□□□ 1.04
ABR-205ENST00000544583 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
ABR-205ENST00000544583 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
ABR-205ENST00000544583 NEFLP07196 543 aa21.37■■□□□ 1.01
ABR-205ENST00000544583 FBLN2P98095 1184 aa21.32■■□□□ 1
ABR-205ENST00000544583 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
ABR-205ENST00000544583 CNGB1Q14028 1251 aaPredicted RBP21.17■□□□□ 0.98
ABR-205ENST00000544583 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
ABR-205ENST00000544583 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
ABR-205ENST00000544583 HRCP23327 699 aa21.05■□□□□ 0.96
ABR-205ENST00000544583 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
ABR-205ENST00000544583 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
ABR-205ENST00000544583 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
ABR-205ENST00000544583 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
ABR-205ENST00000544583 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
ABR-205ENST00000544583 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
ABR-205ENST00000544583 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
ABR-205ENST00000544583 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
ABR-205ENST00000544583 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
ABR-205ENST00000544583 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
ABR-205ENST00000544583 DAXXQ9UER7 740 aaPredicted RBP20.69■□□□□ 0.9
ABR-205ENST00000544583 BCANQ96GW7 911 aa20.65■□□□□ 0.9
ABR-205ENST00000544583 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
ABR-205ENST00000544583 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
ABR-205ENST00000544583 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
ABR-205ENST00000544583 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
ABR-205ENST00000544583 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
ABR-205ENST00000544583 ANP32CO43423 234 aa20.45■□□□□ 0.87
ABR-205ENST00000544583 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
ABR-205ENST00000544583 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
ABR-205ENST00000544583 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
ABR-205ENST00000544583 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
ABR-205ENST00000544583 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
ABR-205ENST00000544583 NACADO15069 1562 aa20.32■□□□□ 0.84
ABR-205ENST00000544583 NEFMP07197 916 aa20.31■□□□□ 0.84
ABR-205ENST00000544583 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
ABR-205ENST00000544583 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.83
ABR-205ENST00000544583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
ABR-205ENST00000544583 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
ABR-205ENST00000544583 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
ABR-205ENST00000544583 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
ABR-205ENST00000544583 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
ABR-205ENST00000544583 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
ABR-205ENST00000544583 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
ABR-205ENST00000544583 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
ABR-205ENST00000544583 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
ABR-205ENST00000544583 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
ABR-205ENST00000544583 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
ABR-205ENST00000544583 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
ABR-205ENST00000544583 CLIP1P30622 1438 aa20.09■□□□□ 0.81
ABR-205ENST00000544583 ERCC6Q03468 1493 aa20.08■□□□□ 0.8
ABR-205ENST00000544583 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
ABR-205ENST00000544583 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
ABR-205ENST00000544583 GTF3C3Q9Y5Q9 886 aa20.02■□□□□ 0.79
ABR-205ENST00000544583 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
ABR-205ENST00000544583 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
ABR-205ENST00000544583 EEA1Q15075 1411 aa19.97■□□□□ 0.79
ABR-205ENST00000544583 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
ABR-205ENST00000544583 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
ABR-205ENST00000544583 RRP7BPQ9NSQ0 103 aa19.95■□□□□ 0.78
ABR-205ENST00000544583 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
ABR-205ENST00000544583 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
ABR-205ENST00000544583 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
ABR-205ENST00000544583 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
ABR-205ENST00000544583 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
ABR-205ENST00000544583 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
ABR-205ENST00000544583 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
ABR-205ENST00000544583 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
ABR-205ENST00000544583 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
ABR-205ENST00000544583 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
ABR-205ENST00000544583 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
ABR-205ENST00000544583 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms