Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 AC008406.3-201ENST00000620001 1374 ntBASIC19.27■□□□□ 0.68
MSL2Q9HCI7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MSL2Q9HCI7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MSL2Q9HCI7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 AL512631.2-201ENST00000604634 923 ntBASIC19.26■□□□□ 0.67
MSL2Q9HCI7 MIR4466-201ENST00000606121 54 ntBASIC19.26■□□□□ 0.67
MSL2Q9HCI7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
MSL2Q9HCI7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MSL2Q9HCI7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL2Q9HCI7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 AL136116.3-201ENST00000402907 1138 ntBASIC19.23■□□□□ 0.67
MSL2Q9HCI7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.23■□□□□ 0.67
MSL2Q9HCI7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL2Q9HCI7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSL2Q9HCI7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.2■□□□□ 0.66
MSL2Q9HCI7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 C17orf82-201ENST00000623772 1530 ntBASIC19.2■□□□□ 0.66
MSL2Q9HCI7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MSL2Q9HCI7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms