Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC20Q8TCA0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC20Q8TCA0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC20Q8TCA0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC20Q8TCA0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC20Q8TCA0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC20Q8TCA0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC20Q8TCA0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC20Q8TCA0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.77■□□□□ 0.59
LRRC20Q8TCA0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LRRC20Q8TCA0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC20Q8TCA0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC20Q8TCA0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC20Q8TCA0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC20Q8TCA0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC20Q8TCA0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC20Q8TCA0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC20Q8TCA0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC20Q8TCA0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC20Q8TCA0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC20Q8TCA0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC20Q8TCA0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms