RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
CBLN3-201ENST00000267406 CCDC180Q9P1Z9 1646 aa39.07■■■■□ 3.85
CBLN3-201ENST00000267406 ZCCHC6Q5VYS8 1495 aaKnown RBP38.52■■■■□ 3.76
CBLN3-201ENST00000267406 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
CBLN3-201ENST00000267406 DCAF8L2P0C7V8 631 aa37.74■■■■□ 3.63
CBLN3-201ENST00000267406 SUPT5HO00267 1087 aaKnown RBP37.54■■■■□ 3.6
CBLN3-201ENST00000267406 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
CBLN3-201ENST00000267406 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
CBLN3-201ENST00000267406 SCRIBQ14160 1630 aa36.45■■■■□ 3.43
CBLN3-201ENST00000267406 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
CBLN3-201ENST00000267406 ABCC9O60706 1549 aa36.34■■■■□ 3.41
CBLN3-201ENST00000267406 NACADO15069 1562 aa36.15■■■■□ 3.38
CBLN3-201ENST00000267406 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
CBLN3-201ENST00000267406 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
CBLN3-201ENST00000267406 CECR2Q9BXF3 1484 aa35.56■■■■□ 3.28
CBLN3-201ENST00000267406 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
CBLN3-201ENST00000267406 WIZO95785 1651 aa35.26■■■■□ 3.23
CBLN3-201ENST00000267406 LOC105371045A0A1W2PR82 267 aa35.24■■■■□ 3.23
CBLN3-201ENST00000267406 UNC13AQ9UPW8 1703 aa35.17■■■■□ 3.22
CBLN3-201ENST00000267406 BAZ1AQ9NRL2 1556 aaPredicted RBP35.08■■■■□ 3.21
CBLN3-201ENST00000267406 TRIM41Q8WV44 630 aa35.03■■■■□ 3.2
CBLN3-201ENST00000267406 SMARCA4P51532 1647 aa34.85■■■■□ 3.17
CBLN3-201ENST00000267406 PCGF6Q9BYE7 350 aa34.81■■■■□ 3.16
CBLN3-201ENST00000267406 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
CBLN3-201ENST00000267406 FAM9AQ8IZU1 332 aaPredicted RBP34.69■■■■□ 3.14
CBLN3-201ENST00000267406 BICRAQ9NZM4 1560 aa34.68■■■■□ 3.14
CBLN3-201ENST00000267406 EIF4G1Q04637 1599 aaKnown RBP34.66■■■■□ 3.14
CBLN3-201ENST00000267406 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
CBLN3-201ENST00000267406 HRCP23327 699 aa34.59■■■■□ 3.13
CBLN3-201ENST00000267406 SMARCA2P51531 1590 aa34.5■■■■□ 3.11
CBLN3-201ENST00000267406 CCDC88BA6NC98 1476 aa34.5■■■■□ 3.11
CBLN3-201ENST00000267406 EHMT2Q96KQ7 1210 aa34.36■■■■□ 3.09
CBLN3-201ENST00000267406 TRIM26Q12899 539 aaPredicted RBP34.29■■■■□ 3.08
CBLN3-201ENST00000267406 ABCC8Q09428 1581 aa34.29■■■■□ 3.08
CBLN3-201ENST00000267406 PEG3Q9GZU2 1588 aa34.21■■■■□ 3.07
CBLN3-201ENST00000267406 ATAD2BQ9ULI0 1458 aa33.99■■■■□ 3.03
CBLN3-201ENST00000267406 PPARGC1BQ86YN6 1023 aaKnown RBP33.9■■■■□ 3.02
CBLN3-201ENST00000267406 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
CBLN3-201ENST00000267406 SOGA1O94964 1423 aa33.86■■■■□ 3.01
CBLN3-201ENST00000267406 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
CBLN3-201ENST00000267406 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
CBLN3-201ENST00000267406 EEA1Q15075 1411 aa33.67■■■□□ 2.98
CBLN3-201ENST00000267406 SYNJ1O43426 1573 aa33.65■■■□□ 2.98
CBLN3-201ENST00000267406 CSRNP3Q8WYN3 585 aa33.62■■■□□ 2.97
CBLN3-201ENST00000267406 CEP162Q5TB80 1403 aa33.53■■■□□ 2.96
CBLN3-201ENST00000267406 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
CBLN3-201ENST00000267406 GOLGA3Q08378 1498 aa33.42■■■□□ 2.94
CBLN3-201ENST00000267406 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
CBLN3-201ENST00000267406 UBTFP17480 764 aaKnown RBP33.41■■■□□ 2.94
CBLN3-201ENST00000267406 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
CBLN3-201ENST00000267406 ZEB1P37275 1124 aaPredicted RBP33.37■■■□□ 2.93
CBLN3-201ENST00000267406 KIF21BO75037 1637 aa33.28■■■□□ 2.92
CBLN3-201ENST00000267406 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
CBLN3-201ENST00000267406 CEP164Q9UPV0 1460 aa33.27■■■□□ 2.92
CBLN3-201ENST00000267406 BIVM-ERCC5R4GMW8 1640 aa33.21■■■□□ 2.91
CBLN3-201ENST00000267406 TTBK1Q5TCY1 1321 aaPredicted RBP33.17■■■□□ 2.9
CBLN3-201ENST00000267406 RAPGEF2Q9Y4G8 1499 aa33.06■■■□□ 2.88
CBLN3-201ENST00000267406 CFTRP13569 1480 aa33.03■■■□□ 2.88
CBLN3-201ENST00000267406 CUX1P39880 1505 aa33.02■■■□□ 2.88
CBLN3-201ENST00000267406 CLIP1P30622 1438 aa32.99■■■□□ 2.87
CBLN3-201ENST00000267406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.96■■■□□ 2.87
CBLN3-201ENST00000267406 PRDM2Q13029 1718 aa32.9■■■□□ 2.86
CBLN3-201ENST00000267406 CCER1Q8TC90 406 aaPredicted RBP32.86■■■□□ 2.85
CBLN3-201ENST00000267406 VPS8Q8N3P4 1428 aa32.82■■■□□ 2.84
CBLN3-201ENST00000267406 PRXQ9BXM0 1461 aa32.81■■■□□ 2.84
CBLN3-201ENST00000267406 ERICH3Q5RHP9 1530 aa32.8■■■□□ 2.84
CBLN3-201ENST00000267406 RANGAP1P46060 587 aaPredicted RBP32.8■■■□□ 2.84
CBLN3-201ENST00000267406 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
CBLN3-201ENST00000267406 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
CBLN3-201ENST00000267406 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
CBLN3-201ENST00000267406 APLP2Q06481 763 aa32.59■■■□□ 2.81
CBLN3-201ENST00000267406 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
CBLN3-201ENST00000267406 CUX2O14529 1486 aa32.5■■■□□ 2.79
CBLN3-201ENST00000267406 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
CBLN3-201ENST00000267406 HNRNPUL2Q1KMD3 747 aaKnown RBP32.44■■■□□ 2.78
CBLN3-201ENST00000267406 FANCD2Q9BXW9 1451 aa32.41■■■□□ 2.78
CBLN3-201ENST00000267406 IGF1RP08069 1367 aa32.4■■■□□ 2.78
CBLN3-201ENST00000267406 ARHGAP35Q9NRY4 1499 aa32.32■■■□□ 2.76
CBLN3-201ENST00000267406 NESP48681 1621 aa32.29■■■□□ 2.76
CBLN3-201ENST00000267406 CARMIL1Q5VZK9 1371 aa32.25■■■□□ 2.75
CBLN3-201ENST00000267406 DNMBPQ6XZF7 1577 aa32.25■■■□□ 2.75
CBLN3-201ENST00000267406 KANK4Q5T7N3 995 aaPredicted RBP32.25■■■□□ 2.75
CBLN3-201ENST00000267406 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
CBLN3-201ENST00000267406 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
CBLN3-201ENST00000267406 POLA1P09884 1462 aaPredicted RBP32.13■■■□□ 2.73
CBLN3-201ENST00000267406 ABCA10Q8WWZ4 1543 aa32.09■■■□□ 2.73
CBLN3-201ENST00000267406 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.73
CBLN3-201ENST00000267406 RRBP1Q9P2E9 1410 aaKnown RBP32■■■□□ 2.71
CBLN3-201ENST00000267406 DIEXFQ68CQ4 756 aaKnown RBP31.99■■■□□ 2.71
CBLN3-201ENST00000267406 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
CBLN3-201ENST00000267406 DNAJC5BQ9UF47 199 aa31.94■■■□□ 2.7
CBLN3-201ENST00000267406 TIAM1Q13009 1591 aa31.93■■■□□ 2.7
CBLN3-201ENST00000267406 WDR97A6NE52 1622 aa31.92■■■□□ 2.7
CBLN3-201ENST00000267406 CUL7Q14999 1698 aa31.92■■■□□ 2.7
CBLN3-201ENST00000267406 ZNF316A6NFI3 1004 aaPredicted RBP31.89■■■□□ 2.7
CBLN3-201ENST00000267406 MAP3K1Q13233 1512 aa31.88■■■□□ 2.69
CBLN3-201ENST00000267406 CCNB3Q8WWL7 1395 aa31.87■■■□□ 2.69
CBLN3-201ENST00000267406 P3H3Q8IVL6 736 aa31.86■■■□□ 2.69
CBLN3-201ENST00000267406 CTTNBP2Q8WZ74 1663 aa31.83■■■□□ 2.69
CBLN3-201ENST00000267406 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms