Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
XPAP23025 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
XPAP23025 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.32□□□□□ -0.12
XPAP23025 SNX18-202ENST00000343017 3140 ntBASIC14.32□□□□□ -0.12
XPAP23025 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
XPAP23025 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
XPAP23025 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 HMGA1P1-201ENST00000415560 1062 ntBASIC14.32□□□□□ -0.12
XPAP23025 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.32□□□□□ -0.12
XPAP23025 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 CEP164P1-201ENST00000455142 418 ntBASIC14.32□□□□□ -0.12
XPAP23025 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 FAM45BP-202ENST00000592932 1624 ntBASIC14.32□□□□□ -0.12
XPAP23025 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
XPAP23025 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XPAP23025 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
XPAP23025 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
XPAP23025 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 OR8T1P-201ENST00000421347 918 ntBASIC14.31□□□□□ -0.12
XPAP23025 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.31□□□□□ -0.12
XPAP23025 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.31□□□□□ -0.12
XPAP23025 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.31□□□□□ -0.12
XPAP23025 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.31□□□□□ -0.12
XPAP23025 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 MIR3677-201ENST00000578964 60 ntBASIC14.31□□□□□ -0.12
XPAP23025 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms