RNA–Protein interactions for RNA: ENST00000535817.1

AP001160.1-201, humanhuman

TSL 3 BASIC

Gene AP001160.1, Length 565 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001160.1-201ENST00000535817 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
AP001160.1-201ENST00000535817 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
AP001160.1-201ENST00000535817 ABCC9O60706 1549 aa31.13■■■□□ 2.57
AP001160.1-201ENST00000535817 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
AP001160.1-201ENST00000535817 NACADO15069 1562 aa29.64■■■□□ 2.34
AP001160.1-201ENST00000535817 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
AP001160.1-201ENST00000535817 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
AP001160.1-201ENST00000535817 ZCCHC6Q5VYS8 1495 aaKnown RBP29.06■■■□□ 2.24
AP001160.1-201ENST00000535817 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
AP001160.1-201ENST00000535817 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
AP001160.1-201ENST00000535817 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
AP001160.1-201ENST00000535817 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
AP001160.1-201ENST00000535817 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
AP001160.1-201ENST00000535817 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
AP001160.1-201ENST00000535817 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
AP001160.1-201ENST00000535817 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
AP001160.1-201ENST00000535817 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.1
AP001160.1-201ENST00000535817 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
AP001160.1-201ENST00000535817 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
AP001160.1-201ENST00000535817 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
AP001160.1-201ENST00000535817 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
AP001160.1-201ENST00000535817 SMARCA2P51531 1590 aa27.25■■□□□ 1.95
AP001160.1-201ENST00000535817 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
AP001160.1-201ENST00000535817 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
AP001160.1-201ENST00000535817 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
AP001160.1-201ENST00000535817 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
AP001160.1-201ENST00000535817 MROH2BQ7Z745 1585 aa26.95■■□□□ 1.9
AP001160.1-201ENST00000535817 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
AP001160.1-201ENST00000535817 CUX2O14529 1486 aa26.84■■□□□ 1.89
AP001160.1-201ENST00000535817 NESP48681 1621 aa26.76■■□□□ 1.87
AP001160.1-201ENST00000535817 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
AP001160.1-201ENST00000535817 WIZO95785 1651 aa26.63■■□□□ 1.85
AP001160.1-201ENST00000535817 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
AP001160.1-201ENST00000535817 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
AP001160.1-201ENST00000535817 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
AP001160.1-201ENST00000535817 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
AP001160.1-201ENST00000535817 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
AP001160.1-201ENST00000535817 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
AP001160.1-201ENST00000535817 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
AP001160.1-201ENST00000535817 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
AP001160.1-201ENST00000535817 CFTRP13569 1480 aa26.25■■□□□ 1.79
AP001160.1-201ENST00000535817 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
AP001160.1-201ENST00000535817 WDR62O43379 1518 aa26.22■■□□□ 1.79
AP001160.1-201ENST00000535817 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
AP001160.1-201ENST00000535817 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
AP001160.1-201ENST00000535817 PRDM2Q13029 1718 aa26■■□□□ 1.75
AP001160.1-201ENST00000535817 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
AP001160.1-201ENST00000535817 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
AP001160.1-201ENST00000535817 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
AP001160.1-201ENST00000535817 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
AP001160.1-201ENST00000535817 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
AP001160.1-201ENST00000535817 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
AP001160.1-201ENST00000535817 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
AP001160.1-201ENST00000535817 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
AP001160.1-201ENST00000535817 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
AP001160.1-201ENST00000535817 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
AP001160.1-201ENST00000535817 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
AP001160.1-201ENST00000535817 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
AP001160.1-201ENST00000535817 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.65
AP001160.1-201ENST00000535817 SOGA1O94964 1423 aa25.37■■□□□ 1.65
AP001160.1-201ENST00000535817 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
AP001160.1-201ENST00000535817 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
AP001160.1-201ENST00000535817 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
AP001160.1-201ENST00000535817 CUX1P39880 1505 aa25.31■■□□□ 1.64
AP001160.1-201ENST00000535817 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
AP001160.1-201ENST00000535817 CHD1O14646 1710 aa25.23■■□□□ 1.63
AP001160.1-201ENST00000535817 RIMBP3CA6NJZ7 1639 aa25.22■■□□□ 1.63
AP001160.1-201ENST00000535817 RIMBP3BA6NNM3 1639 aa25.22■■□□□ 1.63
AP001160.1-201ENST00000535817 RIMBP3Q9UFD9 1639 aa25.22■■□□□ 1.63
AP001160.1-201ENST00000535817 FBLN2P98095 1184 aa25.21■■□□□ 1.63
AP001160.1-201ENST00000535817 ARHGEF11O15085 1522 aa25.18■■□□□ 1.62
AP001160.1-201ENST00000535817 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
AP001160.1-201ENST00000535817 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
AP001160.1-201ENST00000535817 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
AP001160.1-201ENST00000535817 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
AP001160.1-201ENST00000535817 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
AP001160.1-201ENST00000535817 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
AP001160.1-201ENST00000535817 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
AP001160.1-201ENST00000535817 SYNJ2O15056 1496 aa25.04■■□□□ 1.6
AP001160.1-201ENST00000535817 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
AP001160.1-201ENST00000535817 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
AP001160.1-201ENST00000535817 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
AP001160.1-201ENST00000535817 TOP2BQ02880 1626 aa25■■□□□ 1.59
AP001160.1-201ENST00000535817 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
AP001160.1-201ENST00000535817 CYB5RLQ6IPT4 315 aa24.98■■□□□ 1.59
AP001160.1-201ENST00000535817 CLASP1Q7Z460 1538 aa24.97■■□□□ 1.59
AP001160.1-201ENST00000535817 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
AP001160.1-201ENST00000535817 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
AP001160.1-201ENST00000535817 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
AP001160.1-201ENST00000535817 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
AP001160.1-201ENST00000535817 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
AP001160.1-201ENST00000535817 NUP160Q12769 1436 aa24.71■■□□□ 1.55
AP001160.1-201ENST00000535817 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
AP001160.1-201ENST00000535817 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
AP001160.1-201ENST00000535817 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
AP001160.1-201ENST00000535817 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
AP001160.1-201ENST00000535817 ERCC6L2Q5T890 1561 aa24.53■■□□□ 1.52
AP001160.1-201ENST00000535817 CUL7Q14999 1698 aa24.47■■□□□ 1.51
AP001160.1-201ENST00000535817 IGF1RP08069 1367 aa24.47■■□□□ 1.51
AP001160.1-201ENST00000535817 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms