Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 SBF1P1-201ENST00000444527 5631 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 TCAF1P1-201ENST00000414990 2232 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 ABCD1P2-201ENST00000429313 1601 ntBASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 RPL13AP3-202ENST00000494676 1473 ntBASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AL391647.1-201ENST00000395664 511 ntBASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AC097724.1-201ENST00000609581 426 ntBASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMARCC2Q8TAQ2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 POU5F1P2-201ENST00000521750 823 ntBASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 MIR3188-201ENST00000583494 85 ntBASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AC068587.10-201ENST00000641210 219 ntBASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms