RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 NISCHQ9Y2I1 1504 aa35.94■■■■□ 3.34
LINC01006-204ENST00000435354 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
LINC01006-204ENST00000435354 ABCC9O60706 1549 aa32.02■■■□□ 2.72
LINC01006-204ENST00000435354 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
LINC01006-204ENST00000435354 NACADO15069 1562 aa30.37■■■□□ 2.45
LINC01006-204ENST00000435354 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
LINC01006-204ENST00000435354 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.4
LINC01006-204ENST00000435354 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
LINC01006-204ENST00000435354 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
LINC01006-204ENST00000435354 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
LINC01006-204ENST00000435354 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
LINC01006-204ENST00000435354 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
LINC01006-204ENST00000435354 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
LINC01006-204ENST00000435354 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
LINC01006-204ENST00000435354 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
LINC01006-204ENST00000435354 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
LINC01006-204ENST00000435354 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
LINC01006-204ENST00000435354 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
LINC01006-204ENST00000435354 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
LINC01006-204ENST00000435354 SMARCA4P51532 1647 aa28■■■□□ 2.07
LINC01006-204ENST00000435354 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
LINC01006-204ENST00000435354 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
LINC01006-204ENST00000435354 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
LINC01006-204ENST00000435354 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
LINC01006-204ENST00000435354 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
LINC01006-204ENST00000435354 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
LINC01006-204ENST00000435354 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
LINC01006-204ENST00000435354 ERCC6Q03468 1493 aa27.6■■■□□ 2.01
LINC01006-204ENST00000435354 NESP48681 1621 aa27.58■■■□□ 2.01
LINC01006-204ENST00000435354 CUX2O14529 1486 aa27.52■■■□□ 2
LINC01006-204ENST00000435354 WIZO95785 1651 aa27.38■■□□□ 1.97
LINC01006-204ENST00000435354 LAMC3Q9Y6N6 1575 aa27.38■■□□□ 1.97
LINC01006-204ENST00000435354 DNAJC5Q9H3Z4 198 aa27.33■■□□□ 1.97
LINC01006-204ENST00000435354 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
LINC01006-204ENST00000435354 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
LINC01006-204ENST00000435354 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
LINC01006-204ENST00000435354 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
LINC01006-204ENST00000435354 RSF1Q96T23 1441 aaPredicted RBP27.18■■□□□ 1.94
LINC01006-204ENST00000435354 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
LINC01006-204ENST00000435354 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
LINC01006-204ENST00000435354 CFTRP13569 1480 aa26.93■■□□□ 1.9
LINC01006-204ENST00000435354 WDR62O43379 1518 aa26.92■■□□□ 1.9
LINC01006-204ENST00000435354 CEP164Q9UPV0 1460 aa26.89■■□□□ 1.9
LINC01006-204ENST00000435354 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
LINC01006-204ENST00000435354 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
LINC01006-204ENST00000435354 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
LINC01006-204ENST00000435354 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
LINC01006-204ENST00000435354 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
LINC01006-204ENST00000435354 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
LINC01006-204ENST00000435354 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
LINC01006-204ENST00000435354 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
LINC01006-204ENST00000435354 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
LINC01006-204ENST00000435354 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
LINC01006-204ENST00000435354 EIF4G3O43432 1585 aaKnown RBP26.19■■□□□ 1.78
LINC01006-204ENST00000435354 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
LINC01006-204ENST00000435354 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
LINC01006-204ENST00000435354 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
LINC01006-204ENST00000435354 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
LINC01006-204ENST00000435354 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
LINC01006-204ENST00000435354 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
LINC01006-204ENST00000435354 CUX1P39880 1505 aa26.03■■□□□ 1.76
LINC01006-204ENST00000435354 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
LINC01006-204ENST00000435354 SOGA1O94964 1423 aa26■■□□□ 1.75
LINC01006-204ENST00000435354 CHD1O14646 1710 aa25.97■■□□□ 1.75
LINC01006-204ENST00000435354 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
LINC01006-204ENST00000435354 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
LINC01006-204ENST00000435354 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
LINC01006-204ENST00000435354 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
LINC01006-204ENST00000435354 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
LINC01006-204ENST00000435354 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
LINC01006-204ENST00000435354 FBLN2P98095 1184 aa25.83■■□□□ 1.73
LINC01006-204ENST00000435354 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
LINC01006-204ENST00000435354 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
LINC01006-204ENST00000435354 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
LINC01006-204ENST00000435354 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
LINC01006-204ENST00000435354 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
LINC01006-204ENST00000435354 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
LINC01006-204ENST00000435354 ABCA5Q8WWZ7 1642 aa25.69■■□□□ 1.7
LINC01006-204ENST00000435354 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
LINC01006-204ENST00000435354 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
LINC01006-204ENST00000435354 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
LINC01006-204ENST00000435354 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
LINC01006-204ENST00000435354 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
LINC01006-204ENST00000435354 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
LINC01006-204ENST00000435354 CYB5RLQ6IPT4 315 aa25.64■■□□□ 1.7
LINC01006-204ENST00000435354 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
LINC01006-204ENST00000435354 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
LINC01006-204ENST00000435354 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
LINC01006-204ENST00000435354 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
LINC01006-204ENST00000435354 ERICH3Q5RHP9 1530 aa25.39■■□□□ 1.66
LINC01006-204ENST00000435354 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
LINC01006-204ENST00000435354 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
LINC01006-204ENST00000435354 NUP160Q12769 1436 aa25.37■■□□□ 1.65
LINC01006-204ENST00000435354 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
LINC01006-204ENST00000435354 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
LINC01006-204ENST00000435354 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
LINC01006-204ENST00000435354 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
LINC01006-204ENST00000435354 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
LINC01006-204ENST00000435354 IGF1RP08069 1367 aa25.1■■□□□ 1.61
LINC01006-204ENST00000435354 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms