RNA–Protein interactions for RNA: ENST00000512825.6

SLC52A1-203, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2 BASIC

Gene SLC52A1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-203ENST00000512825 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
SLC52A1-203ENST00000512825 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
SLC52A1-203ENST00000512825 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
SLC52A1-203ENST00000512825 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
SLC52A1-203ENST00000512825 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
SLC52A1-203ENST00000512825 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
SLC52A1-203ENST00000512825 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
SLC52A1-203ENST00000512825 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
SLC52A1-203ENST00000512825 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
SLC52A1-203ENST00000512825 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
SLC52A1-203ENST00000512825 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
SLC52A1-203ENST00000512825 ABCC9O60706 1549 aa23.24■■□□□ 1.31
SLC52A1-203ENST00000512825 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
SLC52A1-203ENST00000512825 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
SLC52A1-203ENST00000512825 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
SLC52A1-203ENST00000512825 HRCP23327 699 aa22.93■■□□□ 1.26
SLC52A1-203ENST00000512825 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
SLC52A1-203ENST00000512825 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
SLC52A1-203ENST00000512825 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
SLC52A1-203ENST00000512825 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
SLC52A1-203ENST00000512825 NACADO15069 1562 aa22.79■■□□□ 1.24
SLC52A1-203ENST00000512825 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
SLC52A1-203ENST00000512825 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
SLC52A1-203ENST00000512825 WIZO95785 1651 aa22.56■■□□□ 1.2
SLC52A1-203ENST00000512825 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
SLC52A1-203ENST00000512825 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
SLC52A1-203ENST00000512825 BAZ1AQ9NRL2 1556 aaPredicted RBP22.3■■□□□ 1.16
SLC52A1-203ENST00000512825 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
SLC52A1-203ENST00000512825 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
SLC52A1-203ENST00000512825 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
SLC52A1-203ENST00000512825 UNC13AQ9UPW8 1703 aa22.12■■□□□ 1.13
SLC52A1-203ENST00000512825 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
SLC52A1-203ENST00000512825 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
SLC52A1-203ENST00000512825 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
SLC52A1-203ENST00000512825 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
SLC52A1-203ENST00000512825 SOGA1O94964 1423 aa21.94■■□□□ 1.1
SLC52A1-203ENST00000512825 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
SLC52A1-203ENST00000512825 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
SLC52A1-203ENST00000512825 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.1
SLC52A1-203ENST00000512825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
SLC52A1-203ENST00000512825 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
SLC52A1-203ENST00000512825 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.08
SLC52A1-203ENST00000512825 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
SLC52A1-203ENST00000512825 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
SLC52A1-203ENST00000512825 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
SLC52A1-203ENST00000512825 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
SLC52A1-203ENST00000512825 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
SLC52A1-203ENST00000512825 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.06
SLC52A1-203ENST00000512825 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
SLC52A1-203ENST00000512825 EEA1Q15075 1411 aa21.56■■□□□ 1.04
SLC52A1-203ENST00000512825 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
SLC52A1-203ENST00000512825 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
SLC52A1-203ENST00000512825 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
SLC52A1-203ENST00000512825 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
SLC52A1-203ENST00000512825 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
SLC52A1-203ENST00000512825 CLIP1P30622 1438 aa21.37■■□□□ 1.01
SLC52A1-203ENST00000512825 APLP2Q06481 763 aa21.36■■□□□ 1.01
SLC52A1-203ENST00000512825 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
SLC52A1-203ENST00000512825 KIF21BO75037 1637 aa21.24■□□□□ 0.99
SLC52A1-203ENST00000512825 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
SLC52A1-203ENST00000512825 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
SLC52A1-203ENST00000512825 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
SLC52A1-203ENST00000512825 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
SLC52A1-203ENST00000512825 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
SLC52A1-203ENST00000512825 CUX1P39880 1505 aa21.09■□□□□ 0.97
SLC52A1-203ENST00000512825 KANK4Q5T7N3 995 aaPredicted RBP21.06■□□□□ 0.96
SLC52A1-203ENST00000512825 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
SLC52A1-203ENST00000512825 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
SLC52A1-203ENST00000512825 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
SLC52A1-203ENST00000512825 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
SLC52A1-203ENST00000512825 PRXQ9BXM0 1461 aa21.02■□□□□ 0.96
SLC52A1-203ENST00000512825 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
SLC52A1-203ENST00000512825 CFTRP13569 1480 aa21.01■□□□□ 0.95
SLC52A1-203ENST00000512825 ITGAEP38570 1179 aa20.98■□□□□ 0.95
SLC52A1-203ENST00000512825 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SLC52A1-203ENST00000512825 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
SLC52A1-203ENST00000512825 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
SLC52A1-203ENST00000512825 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
SLC52A1-203ENST00000512825 CUX2O14529 1486 aa20.91■□□□□ 0.94
SLC52A1-203ENST00000512825 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
SLC52A1-203ENST00000512825 CADPSQ9ULU8 1353 aa20.87■□□□□ 0.93
SLC52A1-203ENST00000512825 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
SLC52A1-203ENST00000512825 CENPBP07199 599 aaPredicted RBP20.84■□□□□ 0.93
SLC52A1-203ENST00000512825 IGF1RP08069 1367 aa20.84■□□□□ 0.93
SLC52A1-203ENST00000512825 MIER1Q8N108 512 aa20.82■□□□□ 0.92
SLC52A1-203ENST00000512825 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
SLC52A1-203ENST00000512825 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
SLC52A1-203ENST00000512825 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
SLC52A1-203ENST00000512825 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
SLC52A1-203ENST00000512825 CC2D2AQ9P2K1 1620 aa20.74■□□□□ 0.91
SLC52A1-203ENST00000512825 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
SLC52A1-203ENST00000512825 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
SLC52A1-203ENST00000512825 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
SLC52A1-203ENST00000512825 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
SLC52A1-203ENST00000512825 NESP48681 1621 aa20.67■□□□□ 0.9
SLC52A1-203ENST00000512825 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
SLC52A1-203ENST00000512825 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
SLC52A1-203ENST00000512825 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
SLC52A1-203ENST00000512825 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
SLC52A1-203ENST00000512825 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms