RNA–Protein interactions for RNA: ENST00000527440.1

AP001547.1-201, humanhuman

TSL 3 BASIC

Gene AP001547.1, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001547.1-201ENST00000527440 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
AP001547.1-201ENST00000527440 CCDC180Q9P1Z9 1646 aa31.44■■■□□ 2.62
AP001547.1-201ENST00000527440 ABCC9O60706 1549 aa31.3■■■□□ 2.6
AP001547.1-201ENST00000527440 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
AP001547.1-201ENST00000527440 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
AP001547.1-201ENST00000527440 NACADO15069 1562 aa29.7■■■□□ 2.35
AP001547.1-201ENST00000527440 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
AP001547.1-201ENST00000527440 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.27
AP001547.1-201ENST00000527440 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
AP001547.1-201ENST00000527440 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
AP001547.1-201ENST00000527440 DNAJC5BQ9UF47 199 aa29.06■■■□□ 2.24
AP001547.1-201ENST00000527440 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
AP001547.1-201ENST00000527440 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
AP001547.1-201ENST00000527440 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
AP001547.1-201ENST00000527440 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
AP001547.1-201ENST00000527440 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
AP001547.1-201ENST00000527440 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
AP001547.1-201ENST00000527440 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
AP001547.1-201ENST00000527440 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
AP001547.1-201ENST00000527440 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
AP001547.1-201ENST00000527440 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
AP001547.1-201ENST00000527440 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
AP001547.1-201ENST00000527440 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
AP001547.1-201ENST00000527440 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
AP001547.1-201ENST00000527440 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
AP001547.1-201ENST00000527440 MROH2BQ7Z745 1585 aa27.17■■□□□ 1.94
AP001547.1-201ENST00000527440 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
AP001547.1-201ENST00000527440 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
AP001547.1-201ENST00000527440 NESP48681 1621 aa26.94■■□□□ 1.9
AP001547.1-201ENST00000527440 WIZO95785 1651 aa26.84■■□□□ 1.89
AP001547.1-201ENST00000527440 CUX2O14529 1486 aa26.81■■□□□ 1.88
AP001547.1-201ENST00000527440 LAMC3Q9Y6N6 1575 aa26.76■■□□□ 1.87
AP001547.1-201ENST00000527440 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
AP001547.1-201ENST00000527440 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
AP001547.1-201ENST00000527440 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
AP001547.1-201ENST00000527440 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
AP001547.1-201ENST00000527440 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
AP001547.1-201ENST00000527440 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
AP001547.1-201ENST00000527440 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
AP001547.1-201ENST00000527440 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
AP001547.1-201ENST00000527440 CFTRP13569 1480 aa26.37■■□□□ 1.81
AP001547.1-201ENST00000527440 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
AP001547.1-201ENST00000527440 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
AP001547.1-201ENST00000527440 WDR62O43379 1518 aa26.27■■□□□ 1.8
AP001547.1-201ENST00000527440 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
AP001547.1-201ENST00000527440 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
AP001547.1-201ENST00000527440 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
AP001547.1-201ENST00000527440 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
AP001547.1-201ENST00000527440 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
AP001547.1-201ENST00000527440 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
AP001547.1-201ENST00000527440 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
AP001547.1-201ENST00000527440 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
AP001547.1-201ENST00000527440 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
AP001547.1-201ENST00000527440 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
AP001547.1-201ENST00000527440 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
AP001547.1-201ENST00000527440 EIF4G3O43432 1585 aaKnown RBP25.58■■□□□ 1.69
AP001547.1-201ENST00000527440 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
AP001547.1-201ENST00000527440 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.68
AP001547.1-201ENST00000527440 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
AP001547.1-201ENST00000527440 SOGA1O94964 1423 aa25.56■■□□□ 1.68
AP001547.1-201ENST00000527440 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
AP001547.1-201ENST00000527440 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
AP001547.1-201ENST00000527440 CUX1P39880 1505 aa25.51■■□□□ 1.67
AP001547.1-201ENST00000527440 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
AP001547.1-201ENST00000527440 FBLN2P98095 1184 aa25.46■■□□□ 1.67
AP001547.1-201ENST00000527440 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
AP001547.1-201ENST00000527440 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
AP001547.1-201ENST00000527440 CHD1O14646 1710 aa25.3■■□□□ 1.64
AP001547.1-201ENST00000527440 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
AP001547.1-201ENST00000527440 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
AP001547.1-201ENST00000527440 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
AP001547.1-201ENST00000527440 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
AP001547.1-201ENST00000527440 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
AP001547.1-201ENST00000527440 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
AP001547.1-201ENST00000527440 ARHGEF11O15085 1522 aa25.23■■□□□ 1.63
AP001547.1-201ENST00000527440 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
AP001547.1-201ENST00000527440 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
AP001547.1-201ENST00000527440 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
AP001547.1-201ENST00000527440 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
AP001547.1-201ENST00000527440 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
AP001547.1-201ENST00000527440 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
AP001547.1-201ENST00000527440 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
AP001547.1-201ENST00000527440 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
AP001547.1-201ENST00000527440 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
AP001547.1-201ENST00000527440 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
AP001547.1-201ENST00000527440 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
AP001547.1-201ENST00000527440 ARAP1Q96P48 1450 aa25■■□□□ 1.59
AP001547.1-201ENST00000527440 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
AP001547.1-201ENST00000527440 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
AP001547.1-201ENST00000527440 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
AP001547.1-201ENST00000527440 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
AP001547.1-201ENST00000527440 NUP160Q12769 1436 aa24.82■■□□□ 1.56
AP001547.1-201ENST00000527440 CEP170Q5SW79 1584 aa24.81■■□□□ 1.56
AP001547.1-201ENST00000527440 TRHP20396 242 aaPredicted RBP24.81■■□□□ 1.56
AP001547.1-201ENST00000527440 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
AP001547.1-201ENST00000527440 ERCC6L2Q5T890 1561 aa24.69■■□□□ 1.54
AP001547.1-201ENST00000527440 IGF1RP08069 1367 aa24.68■■□□□ 1.54
AP001547.1-201ENST00000527440 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
AP001547.1-201ENST00000527440 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
AP001547.1-201ENST00000527440 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms