Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 AC005089.1-201ENST00000619486 2241 ntBASIC17.66■□□□□ 0.42
COL15A1P39059 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.66■□□□□ 0.42
COL15A1P39059 INTS4P1-203ENST00000641008 3683 ntBASIC17.66■□□□□ 0.42
COL15A1P39059 CICP16-201ENST00000502609 2813 ntBASIC17.66■□□□□ 0.42
COL15A1P39059 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.66■□□□□ 0.42
COL15A1P39059 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL15A1P39059 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.66■□□□□ 0.42
COL15A1P39059 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL15A1P39059 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.66■□□□□ 0.42
COL15A1P39059 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.66■□□□□ 0.42
COL15A1P39059 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL15A1P39059 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.65■□□□□ 0.42
COL15A1P39059 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.65■□□□□ 0.42
COL15A1P39059 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COL15A1P39059 GGTLC4P-201ENST00000402176 664 ntBASIC17.65■□□□□ 0.42
COL15A1P39059 MIR1307-201ENST00000408840 149 ntBASIC17.65■□□□□ 0.42
COL15A1P39059 IFNWP2-201ENST00000431203 580 ntBASIC17.65■□□□□ 0.42
COL15A1P39059 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.65■□□□□ 0.42
COL15A1P39059 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
COL15A1P39059 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.65■□□□□ 0.42
COL15A1P39059 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.65■□□□□ 0.42
COL15A1P39059 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL15A1P39059 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.65■□□□□ 0.42
COL15A1P39059 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL15A1P39059 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COL15A1P39059 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL15A1P39059 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.64■□□□□ 0.42
COL15A1P39059 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
COL15A1P39059 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.64■□□□□ 0.41
COL15A1P39059 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL15A1P39059 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL15A1P39059 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.64■□□□□ 0.41
COL15A1P39059 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL15A1P39059 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.64■□□□□ 0.41
COL15A1P39059 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL15A1P39059 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL15A1P39059 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL15A1P39059 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 SIRPB3P-201ENST00000340424 1216 ntBASIC17.64■□□□□ 0.41
COL15A1P39059 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 U3.5-201ENST00000363448 216 ntBASIC17.64■□□□□ 0.41
COL15A1P39059 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.64■□□□□ 0.41
COL15A1P39059 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms