RNA–Protein interactions for RNA: ENST00000625012.1

CR382285.1-201, humanhuman

TSL 1 (best) BASIC

Gene CR382285.1, Length 1,485 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR382285.1-201ENST00000625012 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
CR382285.1-201ENST00000625012 ABCC9O60706 1549 aa29.51■■■□□ 2.31
CR382285.1-201ENST00000625012 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
CR382285.1-201ENST00000625012 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
CR382285.1-201ENST00000625012 NACADO15069 1562 aa27.87■■■□□ 2.05
CR382285.1-201ENST00000625012 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
CR382285.1-201ENST00000625012 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
CR382285.1-201ENST00000625012 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
CR382285.1-201ENST00000625012 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.99
CR382285.1-201ENST00000625012 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
CR382285.1-201ENST00000625012 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
CR382285.1-201ENST00000625012 ZCCHC6Q5VYS8 1495 aaKnown RBP27.26■■□□□ 1.95
CR382285.1-201ENST00000625012 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
CR382285.1-201ENST00000625012 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
CR382285.1-201ENST00000625012 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
CR382285.1-201ENST00000625012 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
CR382285.1-201ENST00000625012 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
CR382285.1-201ENST00000625012 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
CR382285.1-201ENST00000625012 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
CR382285.1-201ENST00000625012 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
CR382285.1-201ENST00000625012 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
CR382285.1-201ENST00000625012 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
CR382285.1-201ENST00000625012 HMGXB3Q12766 1538 aa25.56■■□□□ 1.68
CR382285.1-201ENST00000625012 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
CR382285.1-201ENST00000625012 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
CR382285.1-201ENST00000625012 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
CR382285.1-201ENST00000625012 CUX2O14529 1486 aa25.41■■□□□ 1.66
CR382285.1-201ENST00000625012 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
CR382285.1-201ENST00000625012 NESP48681 1621 aa25.35■■□□□ 1.65
CR382285.1-201ENST00000625012 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
CR382285.1-201ENST00000625012 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
CR382285.1-201ENST00000625012 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
CR382285.1-201ENST00000625012 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
CR382285.1-201ENST00000625012 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
CR382285.1-201ENST00000625012 WIZO95785 1651 aa25.03■■□□□ 1.6
CR382285.1-201ENST00000625012 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
CR382285.1-201ENST00000625012 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
CR382285.1-201ENST00000625012 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
CR382285.1-201ENST00000625012 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
CR382285.1-201ENST00000625012 WDR62O43379 1518 aa24.75■■□□□ 1.55
CR382285.1-201ENST00000625012 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
CR382285.1-201ENST00000625012 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
CR382285.1-201ENST00000625012 FANCD2Q9BXW9 1451 aa24.68■■□□□ 1.54
CR382285.1-201ENST00000625012 CFTRP13569 1480 aa24.66■■□□□ 1.54
CR382285.1-201ENST00000625012 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
CR382285.1-201ENST00000625012 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
CR382285.1-201ENST00000625012 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
CR382285.1-201ENST00000625012 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
CR382285.1-201ENST00000625012 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
CR382285.1-201ENST00000625012 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
CR382285.1-201ENST00000625012 OSCARQ8IYS5 282 aa24.2■■□□□ 1.47
CR382285.1-201ENST00000625012 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
CR382285.1-201ENST00000625012 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
CR382285.1-201ENST00000625012 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
CR382285.1-201ENST00000625012 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
CR382285.1-201ENST00000625012 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
CR382285.1-201ENST00000625012 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
CR382285.1-201ENST00000625012 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
CR382285.1-201ENST00000625012 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
CR382285.1-201ENST00000625012 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
CR382285.1-201ENST00000625012 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
CR382285.1-201ENST00000625012 CHD1O14646 1710 aa23.88■■□□□ 1.41
CR382285.1-201ENST00000625012 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
CR382285.1-201ENST00000625012 ARHGEF11O15085 1522 aa23.88■■□□□ 1.41
CR382285.1-201ENST00000625012 SOGA1O94964 1423 aa23.83■■□□□ 1.41
CR382285.1-201ENST00000625012 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
CR382285.1-201ENST00000625012 CUX1P39880 1505 aa23.81■■□□□ 1.4
CR382285.1-201ENST00000625012 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
CR382285.1-201ENST00000625012 FBLN2P98095 1184 aa23.77■■□□□ 1.4
CR382285.1-201ENST00000625012 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
CR382285.1-201ENST00000625012 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
CR382285.1-201ENST00000625012 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
CR382285.1-201ENST00000625012 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
CR382285.1-201ENST00000625012 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
CR382285.1-201ENST00000625012 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
CR382285.1-201ENST00000625012 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
CR382285.1-201ENST00000625012 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
CR382285.1-201ENST00000625012 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
CR382285.1-201ENST00000625012 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
CR382285.1-201ENST00000625012 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
CR382285.1-201ENST00000625012 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
CR382285.1-201ENST00000625012 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
CR382285.1-201ENST00000625012 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
CR382285.1-201ENST00000625012 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
CR382285.1-201ENST00000625012 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
CR382285.1-201ENST00000625012 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
CR382285.1-201ENST00000625012 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
CR382285.1-201ENST00000625012 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
CR382285.1-201ENST00000625012 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
CR382285.1-201ENST00000625012 GRIN2AQ12879 1464 aa23.35■■□□□ 1.33
CR382285.1-201ENST00000625012 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
CR382285.1-201ENST00000625012 NUP160Q12769 1436 aa23.27■■□□□ 1.32
CR382285.1-201ENST00000625012 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
CR382285.1-201ENST00000625012 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
CR382285.1-201ENST00000625012 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
CR382285.1-201ENST00000625012 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
CR382285.1-201ENST00000625012 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
CR382285.1-201ENST00000625012 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
CR382285.1-201ENST00000625012 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
CR382285.1-201ENST00000625012 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms