RNA–Protein interactions for RNA: ENST00000353598.6

MRPS11-202, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 1 (best) BASIC

Gene MRPS11, Length 766 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-202ENST00000353598 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
MRPS11-202ENST00000353598 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
MRPS11-202ENST00000353598 ABCC9O60706 1549 aa29.46■■■□□ 2.31
MRPS11-202ENST00000353598 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
MRPS11-202ENST00000353598 NACADO15069 1562 aa27.94■■■□□ 2.06
MRPS11-202ENST00000353598 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
MRPS11-202ENST00000353598 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
MRPS11-202ENST00000353598 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
MRPS11-202ENST00000353598 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
MRPS11-202ENST00000353598 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
MRPS11-202ENST00000353598 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
MRPS11-202ENST00000353598 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
MRPS11-202ENST00000353598 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
MRPS11-202ENST00000353598 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
MRPS11-202ENST00000353598 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
MRPS11-202ENST00000353598 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
MRPS11-202ENST00000353598 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
MRPS11-202ENST00000353598 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
MRPS11-202ENST00000353598 NCAPD3P42695 1498 aa25.78■■□□□ 1.72
MRPS11-202ENST00000353598 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
MRPS11-202ENST00000353598 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
MRPS11-202ENST00000353598 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
MRPS11-202ENST00000353598 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
MRPS11-202ENST00000353598 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
MRPS11-202ENST00000353598 CUX2O14529 1486 aa25.57■■□□□ 1.68
MRPS11-202ENST00000353598 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
MRPS11-202ENST00000353598 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
MRPS11-202ENST00000353598 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
MRPS11-202ENST00000353598 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
MRPS11-202ENST00000353598 NESP48681 1621 aa25.25■■□□□ 1.63
MRPS11-202ENST00000353598 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
MRPS11-202ENST00000353598 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
MRPS11-202ENST00000353598 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
MRPS11-202ENST00000353598 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
MRPS11-202ENST00000353598 CADPSQ9ULU8 1353 aa24.98■■□□□ 1.59
MRPS11-202ENST00000353598 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
MRPS11-202ENST00000353598 WIZO95785 1651 aa24.87■■□□□ 1.57
MRPS11-202ENST00000353598 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
MRPS11-202ENST00000353598 WDR62O43379 1518 aa24.76■■□□□ 1.55
MRPS11-202ENST00000353598 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
MRPS11-202ENST00000353598 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
MRPS11-202ENST00000353598 CFTRP13569 1480 aa24.68■■□□□ 1.54
MRPS11-202ENST00000353598 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
MRPS11-202ENST00000353598 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
MRPS11-202ENST00000353598 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
MRPS11-202ENST00000353598 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
MRPS11-202ENST00000353598 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
MRPS11-202ENST00000353598 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
MRPS11-202ENST00000353598 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
MRPS11-202ENST00000353598 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
MRPS11-202ENST00000353598 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
MRPS11-202ENST00000353598 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
MRPS11-202ENST00000353598 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
MRPS11-202ENST00000353598 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
MRPS11-202ENST00000353598 EIF4G3O43432 1585 aaKnown RBP24.01■■□□□ 1.43
MRPS11-202ENST00000353598 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
MRPS11-202ENST00000353598 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
MRPS11-202ENST00000353598 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
MRPS11-202ENST00000353598 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
MRPS11-202ENST00000353598 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
MRPS11-202ENST00000353598 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
MRPS11-202ENST00000353598 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
MRPS11-202ENST00000353598 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
MRPS11-202ENST00000353598 SOGA1O94964 1423 aa23.84■■□□□ 1.41
MRPS11-202ENST00000353598 CHD1O14646 1710 aa23.81■■□□□ 1.4
MRPS11-202ENST00000353598 FBLN2P98095 1184 aa23.79■■□□□ 1.4
MRPS11-202ENST00000353598 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
MRPS11-202ENST00000353598 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
MRPS11-202ENST00000353598 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
MRPS11-202ENST00000353598 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
MRPS11-202ENST00000353598 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
MRPS11-202ENST00000353598 CUX1P39880 1505 aa23.69■■□□□ 1.38
MRPS11-202ENST00000353598 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
MRPS11-202ENST00000353598 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
MRPS11-202ENST00000353598 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
MRPS11-202ENST00000353598 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
MRPS11-202ENST00000353598 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
MRPS11-202ENST00000353598 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
MRPS11-202ENST00000353598 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
MRPS11-202ENST00000353598 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
MRPS11-202ENST00000353598 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
MRPS11-202ENST00000353598 TRHP20396 242 aaPredicted RBP23.51■■□□□ 1.35
MRPS11-202ENST00000353598 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
MRPS11-202ENST00000353598 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
MRPS11-202ENST00000353598 ABCA5Q8WWZ7 1642 aa23.46■■□□□ 1.35
MRPS11-202ENST00000353598 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
MRPS11-202ENST00000353598 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
MRPS11-202ENST00000353598 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.33
MRPS11-202ENST00000353598 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
MRPS11-202ENST00000353598 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
MRPS11-202ENST00000353598 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
MRPS11-202ENST00000353598 NUP160Q12769 1436 aa23.27■■□□□ 1.32
MRPS11-202ENST00000353598 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
MRPS11-202ENST00000353598 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
MRPS11-202ENST00000353598 SHROOM2Q13796 1616 aa23.16■■□□□ 1.3
MRPS11-202ENST00000353598 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
MRPS11-202ENST00000353598 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
MRPS11-202ENST00000353598 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
MRPS11-202ENST00000353598 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
MRPS11-202ENST00000353598 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms