Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 HLA-V-204ENST00000476601 1289 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 HLA-J-203ENST00000494367 1087 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 PGAM5P1-201ENST00000518923 814 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SPDYE22P-201ENST00000582158 798 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 MTDHP5-201ENST00000598980 586 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AL359510.2-201ENST00000624958 2249 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 KRT8P28-201ENST00000433288 1390 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SHC1P1-201ENST00000425230 1745 ntBASIC13.41□□□□□ -0.26
LPCAT4Q643R3 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.4□□□□□ -0.26
LPCAT4Q643R3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AL022342.1-201ENST00000400363 863 ntBASIC13.4□□□□□ -0.26
LPCAT4Q643R3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AC093813.1-201ENST00000605066 256 ntBASIC13.4□□□□□ -0.26
LPCAT4Q643R3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 AP001059.3-201ENST00000619053 235 ntBASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LPCAT4Q643R3 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
LPCAT4Q643R3 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC13.4□□□□□ -0.27
LPCAT4Q643R3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LPCAT4Q643R3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
LPCAT4Q643R3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms