RNA–Protein interactions for RNA: ENST00000164139.3

PYGM-201, Transcript of glycogen phosphorylase, muscle associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGM, Length 3,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGM-201ENST00000164139 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
PYGM-201ENST00000164139 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
PYGM-201ENST00000164139 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
PYGM-201ENST00000164139 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
PYGM-201ENST00000164139 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
PYGM-201ENST00000164139 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
PYGM-201ENST00000164139 HRCP23327 699 aa21.38■■□□□ 1.01
PYGM-201ENST00000164139 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
PYGM-201ENST00000164139 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
PYGM-201ENST00000164139 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
PYGM-201ENST00000164139 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
PYGM-201ENST00000164139 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
PYGM-201ENST00000164139 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
PYGM-201ENST00000164139 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
PYGM-201ENST00000164139 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
PYGM-201ENST00000164139 ABCC9O60706 1549 aa20.4■□□□□ 0.86
PYGM-201ENST00000164139 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
PYGM-201ENST00000164139 NACADO15069 1562 aa20.4■□□□□ 0.86
PYGM-201ENST00000164139 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
PYGM-201ENST00000164139 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
PYGM-201ENST00000164139 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
PYGM-201ENST00000164139 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
PYGM-201ENST00000164139 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
PYGM-201ENST00000164139 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
PYGM-201ENST00000164139 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
PYGM-201ENST00000164139 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
PYGM-201ENST00000164139 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
PYGM-201ENST00000164139 MYT1Q01538 1121 aa19.86■□□□□ 0.77
PYGM-201ENST00000164139 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
PYGM-201ENST00000164139 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
PYGM-201ENST00000164139 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
PYGM-201ENST00000164139 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
PYGM-201ENST00000164139 WIZO95785 1651 aa19.76■□□□□ 0.75
PYGM-201ENST00000164139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
PYGM-201ENST00000164139 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
PYGM-201ENST00000164139 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
PYGM-201ENST00000164139 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.74
PYGM-201ENST00000164139 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
PYGM-201ENST00000164139 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
PYGM-201ENST00000164139 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
PYGM-201ENST00000164139 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
PYGM-201ENST00000164139 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
PYGM-201ENST00000164139 DIEXFQ68CQ4 756 aaKnown RBP19.53■□□□□ 0.72
PYGM-201ENST00000164139 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
PYGM-201ENST00000164139 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
PYGM-201ENST00000164139 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PYGM-201ENST00000164139 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
PYGM-201ENST00000164139 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
PYGM-201ENST00000164139 SOGA1O94964 1423 aa19.37■□□□□ 0.69
PYGM-201ENST00000164139 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
PYGM-201ENST00000164139 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
PYGM-201ENST00000164139 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
PYGM-201ENST00000164139 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
PYGM-201ENST00000164139 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
PYGM-201ENST00000164139 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
PYGM-201ENST00000164139 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
PYGM-201ENST00000164139 EEA1Q15075 1411 aa19.2■□□□□ 0.66
PYGM-201ENST00000164139 GOLGA3Q08378 1498 aa19.14■□□□□ 0.66
PYGM-201ENST00000164139 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.66
PYGM-201ENST00000164139 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
PYGM-201ENST00000164139 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
PYGM-201ENST00000164139 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
PYGM-201ENST00000164139 MIER1Q8N108 512 aa19.02■□□□□ 0.64
PYGM-201ENST00000164139 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
PYGM-201ENST00000164139 CLIP1P30622 1438 aa18.98■□□□□ 0.63
PYGM-201ENST00000164139 APLP2Q06481 763 aa18.96■□□□□ 0.63
PYGM-201ENST00000164139 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
PYGM-201ENST00000164139 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
PYGM-201ENST00000164139 KIF21BO75037 1637 aa18.9■□□□□ 0.62
PYGM-201ENST00000164139 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
PYGM-201ENST00000164139 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
PYGM-201ENST00000164139 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
PYGM-201ENST00000164139 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
PYGM-201ENST00000164139 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
PYGM-201ENST00000164139 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
PYGM-201ENST00000164139 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
PYGM-201ENST00000164139 BCANQ96GW7 911 aa18.69■□□□□ 0.58
PYGM-201ENST00000164139 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
PYGM-201ENST00000164139 TOP2BQ02880 1626 aa18.64■□□□□ 0.58
PYGM-201ENST00000164139 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
PYGM-201ENST00000164139 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
PYGM-201ENST00000164139 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
PYGM-201ENST00000164139 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
PYGM-201ENST00000164139 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
PYGM-201ENST00000164139 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
PYGM-201ENST00000164139 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
PYGM-201ENST00000164139 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
PYGM-201ENST00000164139 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
PYGM-201ENST00000164139 ITGAEP38570 1179 aa18.52■□□□□ 0.56
PYGM-201ENST00000164139 CFTRP13569 1480 aa18.52■□□□□ 0.56
PYGM-201ENST00000164139 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
PYGM-201ENST00000164139 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
PYGM-201ENST00000164139 CUX1P39880 1505 aa18.45■□□□□ 0.54
PYGM-201ENST00000164139 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
PYGM-201ENST00000164139 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
PYGM-201ENST00000164139 FKBP8Q14318 412 aa18.37■□□□□ 0.53
PYGM-201ENST00000164139 CUX2O14529 1486 aa18.36■□□□□ 0.53
PYGM-201ENST00000164139 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.53
PYGM-201ENST00000164139 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
PYGM-201ENST00000164139 ATP1B4Q9UN42 357 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms