RNA–Protein interactions for RNA: ENST00000508177.5

GNPDA1-210, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPDA1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-210ENST00000508177 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
GNPDA1-210ENST00000508177 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
GNPDA1-210ENST00000508177 ABCC9O60706 1549 aa24.85■■□□□ 1.57
GNPDA1-210ENST00000508177 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
GNPDA1-210ENST00000508177 NACADO15069 1562 aa24.46■■□□□ 1.51
GNPDA1-210ENST00000508177 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
GNPDA1-210ENST00000508177 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
GNPDA1-210ENST00000508177 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
GNPDA1-210ENST00000508177 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
GNPDA1-210ENST00000508177 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
GNPDA1-210ENST00000508177 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
GNPDA1-210ENST00000508177 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
GNPDA1-210ENST00000508177 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
GNPDA1-210ENST00000508177 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
GNPDA1-210ENST00000508177 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
GNPDA1-210ENST00000508177 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
GNPDA1-210ENST00000508177 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
GNPDA1-210ENST00000508177 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
GNPDA1-210ENST00000508177 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
GNPDA1-210ENST00000508177 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
GNPDA1-210ENST00000508177 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
GNPDA1-210ENST00000508177 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
GNPDA1-210ENST00000508177 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
GNPDA1-210ENST00000508177 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
GNPDA1-210ENST00000508177 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
GNPDA1-210ENST00000508177 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
GNPDA1-210ENST00000508177 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
GNPDA1-210ENST00000508177 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
GNPDA1-210ENST00000508177 WIZO95785 1651 aa21.96■■□□□ 1.11
GNPDA1-210ENST00000508177 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
GNPDA1-210ENST00000508177 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
GNPDA1-210ENST00000508177 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
GNPDA1-210ENST00000508177 CUX2O14529 1486 aa21.68■■□□□ 1.06
GNPDA1-210ENST00000508177 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
GNPDA1-210ENST00000508177 CFTRP13569 1480 aa21.62■■□□□ 1.05
GNPDA1-210ENST00000508177 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
GNPDA1-210ENST00000508177 HRCP23327 699 aa21.61■■□□□ 1.05
GNPDA1-210ENST00000508177 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
GNPDA1-210ENST00000508177 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
GNPDA1-210ENST00000508177 NESP48681 1621 aa21.52■■□□□ 1.04
GNPDA1-210ENST00000508177 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
GNPDA1-210ENST00000508177 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
GNPDA1-210ENST00000508177 WDR62O43379 1518 aa21.46■■□□□ 1.03
GNPDA1-210ENST00000508177 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
GNPDA1-210ENST00000508177 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
GNPDA1-210ENST00000508177 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
GNPDA1-210ENST00000508177 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
GNPDA1-210ENST00000508177 ABCC8Q09428 1581 aa21.32■■□□□ 1
GNPDA1-210ENST00000508177 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
GNPDA1-210ENST00000508177 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
GNPDA1-210ENST00000508177 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
GNPDA1-210ENST00000508177 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
GNPDA1-210ENST00000508177 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
GNPDA1-210ENST00000508177 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
GNPDA1-210ENST00000508177 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
GNPDA1-210ENST00000508177 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
GNPDA1-210ENST00000508177 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
GNPDA1-210ENST00000508177 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
GNPDA1-210ENST00000508177 CUX1P39880 1505 aa20.88■□□□□ 0.93
GNPDA1-210ENST00000508177 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
GNPDA1-210ENST00000508177 POLA1P09884 1462 aaPredicted RBP20.85■□□□□ 0.93
GNPDA1-210ENST00000508177 EIF4G3O43432 1585 aaKnown RBP20.79■□□□□ 0.92
GNPDA1-210ENST00000508177 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
GNPDA1-210ENST00000508177 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
GNPDA1-210ENST00000508177 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
GNPDA1-210ENST00000508177 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
GNPDA1-210ENST00000508177 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
GNPDA1-210ENST00000508177 SOGA1O94964 1423 aa20.7■□□□□ 0.9
GNPDA1-210ENST00000508177 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
GNPDA1-210ENST00000508177 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
GNPDA1-210ENST00000508177 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
GNPDA1-210ENST00000508177 DNAJC5Q9H3Z4 198 aa20.65■□□□□ 0.9
GNPDA1-210ENST00000508177 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
GNPDA1-210ENST00000508177 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
GNPDA1-210ENST00000508177 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
GNPDA1-210ENST00000508177 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
GNPDA1-210ENST00000508177 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
GNPDA1-210ENST00000508177 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
GNPDA1-210ENST00000508177 CHD1O14646 1710 aa20.52■□□□□ 0.88
GNPDA1-210ENST00000508177 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
GNPDA1-210ENST00000508177 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
GNPDA1-210ENST00000508177 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
GNPDA1-210ENST00000508177 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
GNPDA1-210ENST00000508177 SNAPC4Q5SXM2 1469 aa20.44■□□□□ 0.86
GNPDA1-210ENST00000508177 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
GNPDA1-210ENST00000508177 CUL7Q14999 1698 aa20.43■□□□□ 0.86
GNPDA1-210ENST00000508177 ZEB1P37275 1124 aaPredicted RBP20.39■□□□□ 0.85
GNPDA1-210ENST00000508177 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
GNPDA1-210ENST00000508177 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
GNPDA1-210ENST00000508177 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
GNPDA1-210ENST00000508177 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
GNPDA1-210ENST00000508177 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
GNPDA1-210ENST00000508177 NUP160Q12769 1436 aa20.31■□□□□ 0.84
GNPDA1-210ENST00000508177 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
GNPDA1-210ENST00000508177 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
GNPDA1-210ENST00000508177 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
GNPDA1-210ENST00000508177 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
GNPDA1-210ENST00000508177 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
GNPDA1-210ENST00000508177 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
GNPDA1-210ENST00000508177 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms