Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC1P02654 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC1P02654 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.68□□□□□ -0.38
APOC1P02654 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
APOC1P02654 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 CHMP1AP1-201ENST00000445563 662 ntBASIC12.68□□□□□ -0.38
APOC1P02654 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC1P02654 AP000812.2-201ENST00000538934 718 ntBASIC12.68□□□□□ -0.38
APOC1P02654 CR383656.12-201ENST00000549567 513 ntBASIC12.68□□□□□ -0.38
APOC1P02654 C2orf69P2-201ENST00000562032 1123 ntBASIC12.68□□□□□ -0.38
APOC1P02654 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC1P02654 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC1P02654 KRT18P8-201ENST00000581937 1246 ntBASIC12.68□□□□□ -0.38
APOC1P02654 MIR3197-201ENST00000582241 73 ntBASIC12.68□□□□□ -0.38
APOC1P02654 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 AC021016.3-201ENST00000608367 477 ntBASIC12.68□□□□□ -0.38
APOC1P02654 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.68□□□□□ -0.38
APOC1P02654 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
APOC1P02654 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC1P02654 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC1P02654 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC1P02654 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms