RNA–Protein interactions for RNA: ENST00000622355.1

AL139260.2-201, humanhuman

TSL 2 BASIC

Gene AL139260.2, Length 2,171 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.2-201ENST00000622355 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
AL139260.2-201ENST00000622355 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
AL139260.2-201ENST00000622355 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
AL139260.2-201ENST00000622355 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
AL139260.2-201ENST00000622355 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
AL139260.2-201ENST00000622355 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
AL139260.2-201ENST00000622355 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
AL139260.2-201ENST00000622355 ABCC9O60706 1549 aa25.32■■□□□ 1.64
AL139260.2-201ENST00000622355 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
AL139260.2-201ENST00000622355 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
AL139260.2-201ENST00000622355 NACADO15069 1562 aa25.05■■□□□ 1.6
AL139260.2-201ENST00000622355 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.56
AL139260.2-201ENST00000622355 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
AL139260.2-201ENST00000622355 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
AL139260.2-201ENST00000622355 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
AL139260.2-201ENST00000622355 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
AL139260.2-201ENST00000622355 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
AL139260.2-201ENST00000622355 WIZO95785 1651 aa24.31■■□□□ 1.48
AL139260.2-201ENST00000622355 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
AL139260.2-201ENST00000622355 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
AL139260.2-201ENST00000622355 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
AL139260.2-201ENST00000622355 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
AL139260.2-201ENST00000622355 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
AL139260.2-201ENST00000622355 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
AL139260.2-201ENST00000622355 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
AL139260.2-201ENST00000622355 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
AL139260.2-201ENST00000622355 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
AL139260.2-201ENST00000622355 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
AL139260.2-201ENST00000622355 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
AL139260.2-201ENST00000622355 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
AL139260.2-201ENST00000622355 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
AL139260.2-201ENST00000622355 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
AL139260.2-201ENST00000622355 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
AL139260.2-201ENST00000622355 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
AL139260.2-201ENST00000622355 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
AL139260.2-201ENST00000622355 SOGA1O94964 1423 aa23.27■■□□□ 1.32
AL139260.2-201ENST00000622355 HRCP23327 699 aa23.24■■□□□ 1.31
AL139260.2-201ENST00000622355 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
AL139260.2-201ENST00000622355 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
AL139260.2-201ENST00000622355 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
AL139260.2-201ENST00000622355 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
AL139260.2-201ENST00000622355 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
AL139260.2-201ENST00000622355 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
AL139260.2-201ENST00000622355 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.29
AL139260.2-201ENST00000622355 EEA1Q15075 1411 aa23.05■■□□□ 1.28
AL139260.2-201ENST00000622355 PPARGC1BQ86YN6 1023 aaKnown RBP22.96■■□□□ 1.27
AL139260.2-201ENST00000622355 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
AL139260.2-201ENST00000622355 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
AL139260.2-201ENST00000622355 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
AL139260.2-201ENST00000622355 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
AL139260.2-201ENST00000622355 CFTRP13569 1480 aa22.88■■□□□ 1.25
AL139260.2-201ENST00000622355 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
AL139260.2-201ENST00000622355 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
AL139260.2-201ENST00000622355 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
AL139260.2-201ENST00000622355 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
AL139260.2-201ENST00000622355 CUX1P39880 1505 aa22.79■■□□□ 1.24
AL139260.2-201ENST00000622355 KIF21BO75037 1637 aa22.79■■□□□ 1.24
AL139260.2-201ENST00000622355 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
AL139260.2-201ENST00000622355 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
AL139260.2-201ENST00000622355 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
AL139260.2-201ENST00000622355 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
AL139260.2-201ENST00000622355 CLIP1P30622 1438 aa22.59■■□□□ 1.21
AL139260.2-201ENST00000622355 PRXQ9BXM0 1461 aa22.57■■□□□ 1.2
AL139260.2-201ENST00000622355 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
AL139260.2-201ENST00000622355 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
AL139260.2-201ENST00000622355 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
AL139260.2-201ENST00000622355 NESP48681 1621 aa22.47■■□□□ 1.19
AL139260.2-201ENST00000622355 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
AL139260.2-201ENST00000622355 ZEB1P37275 1124 aaPredicted RBP22.46■■□□□ 1.19
AL139260.2-201ENST00000622355 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
AL139260.2-201ENST00000622355 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
AL139260.2-201ENST00000622355 CUX2O14529 1486 aa22.42■■□□□ 1.18
AL139260.2-201ENST00000622355 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
AL139260.2-201ENST00000622355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
AL139260.2-201ENST00000622355 IGF1RP08069 1367 aa22.37■■□□□ 1.17
AL139260.2-201ENST00000622355 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
AL139260.2-201ENST00000622355 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
AL139260.2-201ENST00000622355 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
AL139260.2-201ENST00000622355 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
AL139260.2-201ENST00000622355 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.15
AL139260.2-201ENST00000622355 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
AL139260.2-201ENST00000622355 APLP2Q06481 763 aa22.25■■□□□ 1.15
AL139260.2-201ENST00000622355 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
AL139260.2-201ENST00000622355 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
AL139260.2-201ENST00000622355 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
AL139260.2-201ENST00000622355 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
AL139260.2-201ENST00000622355 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
AL139260.2-201ENST00000622355 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
AL139260.2-201ENST00000622355 HNRNPUL2Q1KMD3 747 aaKnown RBP22.12■■□□□ 1.13
AL139260.2-201ENST00000622355 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
AL139260.2-201ENST00000622355 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
AL139260.2-201ENST00000622355 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
AL139260.2-201ENST00000622355 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
AL139260.2-201ENST00000622355 CUL7Q14999 1698 aa21.98■■□□□ 1.11
AL139260.2-201ENST00000622355 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
AL139260.2-201ENST00000622355 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
AL139260.2-201ENST00000622355 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
AL139260.2-201ENST00000622355 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
AL139260.2-201ENST00000622355 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
AL139260.2-201ENST00000622355 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms