RNA–Protein interactions for RNA: ENST00000549567.1

CR383656.12-201, humanhuman

BASIC

Gene CR383656.12, Length 513 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.12-201ENST00000549567 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
CR383656.12-201ENST00000549567 ABCC9O60706 1549 aa35.83■■■■□ 3.33
CR383656.12-201ENST00000549567 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
CR383656.12-201ENST00000549567 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
CR383656.12-201ENST00000549567 DNAJC5BQ9UF47 199 aa34.02■■■■□ 3.04
CR383656.12-201ENST00000549567 NACADO15069 1562 aa33.81■■■■□ 3
CR383656.12-201ENST00000549567 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
CR383656.12-201ENST00000549567 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
CR383656.12-201ENST00000549567 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
CR383656.12-201ENST00000549567 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
CR383656.12-201ENST00000549567 BICRAQ9NZM4 1560 aa33.03■■■□□ 2.88
CR383656.12-201ENST00000549567 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
CR383656.12-201ENST00000549567 DCAF1Q9Y4B6 1507 aa32.76■■■□□ 2.83
CR383656.12-201ENST00000549567 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
CR383656.12-201ENST00000549567 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
CR383656.12-201ENST00000549567 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
CR383656.12-201ENST00000549567 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
CR383656.12-201ENST00000549567 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
CR383656.12-201ENST00000549567 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
CR383656.12-201ENST00000549567 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
CR383656.12-201ENST00000549567 CUX2O14529 1486 aa31.2■■■□□ 2.58
CR383656.12-201ENST00000549567 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
CR383656.12-201ENST00000549567 ERCC6Q03468 1493 aa31.01■■■□□ 2.55
CR383656.12-201ENST00000549567 SMARCA2P51531 1590 aa30.95■■■□□ 2.54
CR383656.12-201ENST00000549567 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
CR383656.12-201ENST00000549567 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
CR383656.12-201ENST00000549567 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
CR383656.12-201ENST00000549567 BAZ1BQ9UIG0 1483 aaKnown RBP30.68■■■□□ 2.5
CR383656.12-201ENST00000549567 NESP48681 1621 aa30.67■■■□□ 2.5
CR383656.12-201ENST00000549567 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
CR383656.12-201ENST00000549567 LAMC3Q9Y6N6 1575 aa30.53■■■□□ 2.48
CR383656.12-201ENST00000549567 PDS5BQ9NTI5 1447 aa30.45■■■□□ 2.46
CR383656.12-201ENST00000549567 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
CR383656.12-201ENST00000549567 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
CR383656.12-201ENST00000549567 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
CR383656.12-201ENST00000549567 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
CR383656.12-201ENST00000549567 MRC2Q9UBG0 1479 aa30.11■■■□□ 2.41
CR383656.12-201ENST00000549567 WDR62O43379 1518 aa30.03■■■□□ 2.4
CR383656.12-201ENST00000549567 WIZO95785 1651 aa29.91■■■□□ 2.38
CR383656.12-201ENST00000549567 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
CR383656.12-201ENST00000549567 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
CR383656.12-201ENST00000549567 CFTRP13569 1480 aa29.85■■■□□ 2.37
CR383656.12-201ENST00000549567 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
CR383656.12-201ENST00000549567 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
CR383656.12-201ENST00000549567 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
CR383656.12-201ENST00000549567 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
CR383656.12-201ENST00000549567 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
CR383656.12-201ENST00000549567 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
CR383656.12-201ENST00000549567 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
CR383656.12-201ENST00000549567 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
CR383656.12-201ENST00000549567 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
CR383656.12-201ENST00000549567 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
CR383656.12-201ENST00000549567 TOPBP1Q92547 1522 aa29.23■■■□□ 2.27
CR383656.12-201ENST00000549567 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
CR383656.12-201ENST00000549567 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
CR383656.12-201ENST00000549567 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
CR383656.12-201ENST00000549567 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
CR383656.12-201ENST00000549567 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
CR383656.12-201ENST00000549567 EIF4G3O43432 1585 aaKnown RBP29.02■■■□□ 2.24
CR383656.12-201ENST00000549567 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
CR383656.12-201ENST00000549567 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.23
CR383656.12-201ENST00000549567 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
CR383656.12-201ENST00000549567 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
CR383656.12-201ENST00000549567 FBLN2P98095 1184 aa28.85■■■□□ 2.21
CR383656.12-201ENST00000549567 SOGA1O94964 1423 aa28.84■■■□□ 2.21
CR383656.12-201ENST00000549567 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
CR383656.12-201ENST00000549567 CHD1O14646 1710 aa28.8■■■□□ 2.2
CR383656.12-201ENST00000549567 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
CR383656.12-201ENST00000549567 TDRD9Q8NDG6 1382 aaKnown RBP28.76■■■□□ 2.2
CR383656.12-201ENST00000549567 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
CR383656.12-201ENST00000549567 TRHP20396 242 aaPredicted RBP28.74■■■□□ 2.19
CR383656.12-201ENST00000549567 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
CR383656.12-201ENST00000549567 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
CR383656.12-201ENST00000549567 FGD5Q6ZNL6 1462 aa28.65■■■□□ 2.18
CR383656.12-201ENST00000549567 SNAPC4Q5SXM2 1469 aa28.64■■■□□ 2.17
CR383656.12-201ENST00000549567 GRIN2BQ13224 1484 aa28.62■■■□□ 2.17
CR383656.12-201ENST00000549567 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
CR383656.12-201ENST00000549567 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
CR383656.12-201ENST00000549567 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
CR383656.12-201ENST00000549567 CUX1P39880 1505 aa28.56■■■□□ 2.16
CR383656.12-201ENST00000549567 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.14
CR383656.12-201ENST00000549567 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
CR383656.12-201ENST00000549567 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
CR383656.12-201ENST00000549567 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
CR383656.12-201ENST00000549567 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
CR383656.12-201ENST00000549567 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
CR383656.12-201ENST00000549567 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
CR383656.12-201ENST00000549567 NUP160Q12769 1436 aa28.18■■■□□ 2.1
CR383656.12-201ENST00000549567 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
CR383656.12-201ENST00000549567 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
CR383656.12-201ENST00000549567 CEP170Q5SW79 1584 aa28.06■■■□□ 2.08
CR383656.12-201ENST00000549567 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
CR383656.12-201ENST00000549567 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
CR383656.12-201ENST00000549567 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
CR383656.12-201ENST00000549567 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
CR383656.12-201ENST00000549567 SHROOM2Q13796 1616 aa28.03■■■□□ 2.08
CR383656.12-201ENST00000549567 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
CR383656.12-201ENST00000549567 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
CR383656.12-201ENST00000549567 PRG4Q92954 1404 aaPredicted RBP27.9■■■□□ 2.06
CR383656.12-201ENST00000549567 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms